SelenoDB
Release 2.0
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Transcript Report for SPT00002249_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesProcavia capensis (Hyrax)
Transcript IDSPT00002249
Transcript release2.0
External IDNone
Gene SPG00002156_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002249_2.0 # Transcript # Selenocysteine synthase (SecS) # Hyrax (Procavia capensis) # Full length # Forward
ATGAATCTCGAGAGTTTCGCGGCCGGCGAGCGGCTGGTGTCTCCGTCCTACGTGCGGCAG
GGTTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGTACCG
AGTTGTCGGTCTTCTGCCGAGCCGCCGCGACTCCAGCCTTCAGCTTGTGCAGGGTCCCGC
CGAAGCTCTGCTCTTGGCTTCAGATATGTCTCCAGAGTTTTTTTTTTTTTTTTTTTCAGC
TCGGCTTTGCTACACTGACTAGCAGCGCTTAGTTGCGTTCATCCTTGTCAAAGCCAGCGA
AACTCCGGGGTGTTAATTGGGGGTATTTATGATCGAAGTCTCGTGCTCTGCGTTTTCTAA
CTTCGGGATGCAGAAATGAGGAAACAGCTTAGTTATTTTATTGTTCTGTTTGCGGCAAGG
GCAAAGTTCGCTCTTTCTATATACCGTCACTCCCGGGGACTCAGGGATCACGTTGCGTTT
GTAAATAAACCACTGCCTACTAATCTGAACTAAGTGCTGCCGTGTGTAACTACTGCCGGC
ATTCCTGAATTTTAATTACGTTCTTTTGACATCGCCTGGTTACAACACCTTGAAGAGTCT
TCGTTAAGGATATGGAATGAAACAAACACCAGTGAAGGTTTTGAGTTACTTTAATTTACA
GAAGCCTTGAAATCTGAGTAATCGCATCACCGGCGTTTATCCGCACTTCTTTCACTCTGT
AGATAATTATAATCAAATGGGACACAAACTGTTTTTACACTTGAGGCCTGTTCATAGTGC
TGCTGTTAGGTGTTAATTTTAGAAAGCAGATATCAGGGCAAAATACACATTGAAGCGTTT
TAAAATACACCCAAGTAGGGGAACTTATACAAAGTTTTTTTTTTTTTTAAGGGCAAGTGT
CCAGAGGATGGCTGGGAGGAGAGTACCCTTGAACTTTTTCTACATGAACTTGCAATCATG
GATAGCAACAATTTCCTGGGCAATTGTGGTGTAGGAGAAAGGGAAGGGCGAGTGGCATCT
GCATTAGTTGCTCGTCGCCATTACAGGTGTGTGTTTTTATGTAGTATGTGAAAACATTTC
TGTCCTGTTTTTGGTTAAAAGCGATGGTGGTAGTACCCATTTGTATACTTTCACCTGCTT
CTTCAGGGAGATATAAACAATTATCTGACTGTTGTTTTTCAAAGGTAATACGTCAGAATT
GTGTACAGATGACCCGCTAAGATTCTAGAATCAGGTTGTTAACATGCTGCTTATATGTTT
TGTTAAGATCTTTAAAAGGCTTACGTGTAGCTATAGCTACCTAGCTTTGTTATACTAGAT
GTAAGAAAAGACGTGTTTAATTTTAGATTGCTTAGTCAGTTTTTGCAAAGTTCCTTCAGA
AAGTTTCTTACCAGCTACAAGTTATTTGCTACCTACTGCCGAGGAGTTGATTCCTACTCA
TAGTAACCCTGTTGGACAGAGTCAGACTGGCCTACAGGGTTTCTGAGGAGCACCTGGCAG
GTTTGAACAGTTGACTTTTTGGTTAGCGCAGGTAGTACTTAACTGCCACACCACCAGGGT
TTCGGTTAATTGATAGTGGTTCCAAATGTGATCATTTCTTTGTCCTCTAACCAAACTCTT
AAAAACTCGTGTCTGCTGTGATTTTAAATCAAGATAGAATTTTATTTCAATCAAAACCAC
TGCAGTGAAACTAGTGATAATGTATAGCTTGGATGAAAATTTCGTGATTAAGAGTGGGCT
GATAACATGGTAATATGCATGAAAAAGATTTCTTGTACATATGAGGTTTTTTGTGGTGAT
AAAGTATAATACTAGTGTTCTGTGATAATCTGAGTGTACAGAATTTCTCATCAGACTAAA
GTACAAAACCCACTGCCTTTGAGTCAGTTCCAACTCATAGCGACTCCATAGGACAGAGTA
GAACTACCCTGTAGGGTTTCCAAGGAGTGCTTGGCAGATTTGAACCACTGACTTTTTTGG
TTAGCCAGCCAAGTGCCAAGTGCCGTCGAGTCAGATCCGACTCAGATGTAGCATATAGCT
ACTACGCCAGCAGGGTAGTACAAACATCTTTTCAAATTACAAGAAGTTTTTTTTTTTTTG
AAGAGTCTTCAGAGGTATCTTTGGTGTGGACCCATTGCTATCGAGTCAATTCTGACTCCT
AGTGACCCCACAGGACAGAGTAGAACTGCCCCATAGGGTTTCACAGGAGCATTTTTGATT
AACAGCTGAGCTCTTAACACACAGTTACAGTGTATGTCAGGTTGTAATGAATGCTGAGGT
ACAAGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTATTAAG
AGTGTAGAAAAATATATAACTTTCAAGTATTGCTCTGGTATTTTTTTGTATTTGTATACT
ATGGGGGTTTCCTTAAAACAGTGAATATATTGTCCAGTTCTTGGCCCGTCTTTTGCTTAG
GTTCATTCATGGAATTGGACGATCAGGTGATATTGCTGCTGTGCAGCCAAAAGCCGCAGG
TTCCAGCCTTCTGAACAAAATCACCAATTCTATAGTCTTAGACATCATAAAACTGGCTGG
TAAGTATCACGTAAATCACAGCACTTTGGGCTGACTAACTATACATCTTTGCCTAATTTT
TTTCATATTAATGTCACTTTCCAGAAAGTGAAAAGTTGAGTATAAAAAGATTTTTAGAAT
AAAATAGAAATCAGCCTTAAGCCATAGGATGAGTTTGTCATCGAGTTTACTCTTAGTCCT
ACAGTACTGCTCTAACAGAAATACCTCAAGTGGATGGCTTTAATGAAGAAAAGTTTGTTC
GTAAATAGTCCAGTAGGCTAGAAGTCCAAATTCAGGGTGTCGCCTCCAGGGAATGCACTC
TCTCTGCATTTGGTCTGTGAGGATCTTGGTGCAGGAACTTCAGATGTGAAAGATGTACTC
TGCTCTTGTTGCTACTTTCTTGATGGTATGAGGTCCTCAGCTCTCTGCCTTCTTCCCTTT
CCTTGTGTCTTTTATGGGATAAAAGATGGTGCAAGCCACACTCCTGGGAAACTCCCTACA
TTGGAGCACGGAGGTGACCTTAGAAAGGGTGTTACAGTCCCACCTTAATCCTGTTTCACG
TAATCCAGTCTATAAAGTGTAGCAATTAAATCTGCAAACTTAATGGCTCCTAGTGCTGCA
TACCTCACTGATGATTATCACTGCTGTCACTTTGAAGTACTTGCCTTGAGAAGCTATGAA
CTGACCACCTGTGCCTGATCCACCCTTTAAAGTAGTTTTGGAACTCTTTCTGGAATGGCC
ATGGTGCACAGAGGCAGGATTGTAAACTTACTTGTGTAATTGTCTGTGAGGGAGTTTTTA
AATAACTGTGTTGGAATACCCTCCCTACTCATCTGATCTGGCCCCCAGTGACTTTTTTTT
TTACCCAAAGATAAAGGAAATATTGAAAGGAAGACATTTTGATGCCATTCAGGACATCAA
AGGTAATATGACAACAGCTCTGATGGCCATTCCAGAAAAAGAGTTCCAGAACTGCTTTGA
AGGGTGCGCTAGGCACTGGCAAGTACTCCTAGTAGGAGTAGTTCAGAGGTGAGCATATTG
ATATTCAGCAGTGAGGTATGTAGCACTGTCTAGGTTGAAGTCACAAACTTAATTGTCAGA
CCTTGTATTAACAGGCAGAGATTAGAATTTACAGGTCGGGAATGTCACAAAATGGAGGAC
AATCACCCAGTACCGGGAATCATGGCCCAGTAAGATTGCTACACACAGTTTTTGTAGAAC
GCAGTTCAACCCATGACACTTACTGAGAGCCAGCACAGAAGAGGAAACAGGGCTATAATT
CTTATTACTTGGTAGAAGAATTATATCATTTCTGTAAGAATTATACTAGCTTTTTATTAG
AGTAGCTAATTTGTTTTATCTTTGATTTATAGGTGTCCACACAGTGGCCAGCTGCTTTGT
AGTTCCAATGGCAACTGGTATGAGTCTAACCCTATGTTTCTTAACGTTGCGGCACAAGAG
ACCAGAGGCAAAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCGAT
GATCACTGCTGGTAAA
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