SelenoDB
Release 2.0
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Transcript Report for SPT00002249_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesProcavia capensis (Hyrax)
Transcript IDSPT00002249
Transcript release2.0
External IDNone
Gene SPG00002156_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002249_2.0 # Transcript # Selenocysteine synthase (SecS) # Hyrax (Procavia capensis) # Full length # Reverse
TTTACCAGCAGTGATCATCGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATAAT
ATACTTTGCCTCTGGTCTCTTGTGCCGCAACGTTAAGAAACATAGGGTTAGACTCATACC
AGTTGCCATTGGAACTACAAAGCAGCTGGCCACTGTGTGGACACCTATAAATCAAAGATA
AAACAAATTAGCTACTCTAATAAAAAGCTAGTATAATTCTTACAGAAATGATATAATTCT
TCTACCAAGTAATAAGAATTATAGCCCTGTTTCCTCTTCTGTGCTGGCTCTCAGTAAGTG
TCATGGGTTGAACTGCGTTCTACAAAAACTGTGTGTAGCAATCTTACTGGGCCATGATTC
CCGGTACTGGGTGATTGTCCTCCATTTTGTGACATTCCCGACCTGTAAATTCTAATCTCT
GCCTGTTAATACAAGGTCTGACAATTAAGTTTGTGACTTCAACCTAGACAGTGCTACATA
CCTCACTGCTGAATATCAATATGCTCACCTCTGAACTACTCCTACTAGGAGTACTTGCCA
GTGCCTAGCGCACCCTTCAAAGCAGTTCTGGAACTCTTTTTCTGGAATGGCCATCAGAGC
TGTTGTCATATTACCTTTGATGTCCTGAATGGCATCAAAATGTCTTCCTTTCAATATTTC
CTTTATCTTTGGGTAAAAAAAAAAGTCACTGGGGGCCAGATCAGATGAGTAGGGAGGGTA
TTCCAACACAGTTATTTAAAAACTCCCTCACAGACAATTACACAAGTAAGTTTACAATCC
TGCCTCTGTGCACCATGGCCATTCCAGAAAGAGTTCCAAAACTACTTTAAAGGGTGGATC
AGGCACAGGTGGTCAGTTCATAGCTTCTCAAGGCAAGTACTTCAAAGTGACAGCAGTGAT
AATCATCAGTGAGGTATGCAGCACTAGGAGCCATTAAGTTTGCAGATTTAATTGCTACAC
TTTATAGACTGGATTACGTGAAACAGGATTAAGGTGGGACTGTAACACCCTTTCTAAGGT
CACCTCCGTGCTCCAATGTAGGGAGTTTCCCAGGAGTGTGGCTTGCACCATCTTTTATCC
CATAAAAGACACAAGGAAAGGGAAGAAGGCAGAGAGCTGAGGACCTCATACCATCAAGAA
AGTAGCAACAAGAGCAGAGTACATCTTTCACATCTGAAGTTCCTGCACCAAGATCCTCAC
AGACCAAATGCAGAGAGAGTGCATTCCCTGGAGGCGACACCCTGAATTTGGACTTCTAGC
CTACTGGACTATTTACGAACAAACTTTTCTTCATTAAAGCCATCCACTTGAGGTATTTCT
GTTAGAGCAGTACTGTAGGACTAAGAGTAAACTCGATGACAAACTCATCCTATGGCTTAA
GGCTGATTTCTATTTTATTCTAAAAATCTTTTTATACTCAACTTTTCACTTTCTGGAAAG
TGACATTAATATGAAAAAAATTAGGCAAAGATGTATAGTTAGTCAGCCCAAAGTGCTGTG
ATTTACGTGATACTTACCAGCCAGTTTTATGATGTCTAAGACTATAGAATTGGTGATTTT
GTTCAGAAGGCTGGAACCTGCGGCTTTTGGCTGCACAGCAGCAATATCACCTGATCGTCC
AATTCCATGAATGAACCTAAGCAAAAGACGGGCCAAGAACTGGACAATATATTCACTGTT
TTAAGGAAACCCCCATAGTATACAAATACAAAAAAATACCAGAGCAATACTTGAAAGTTA
TATATTTTTCTACACTCTTAATAATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCATCTTGTACCTCAGCATTCATTACAACCTGACATACACTGTAACTGTGTGT
TAAGAGCTCAGCTGTTAATCAAAAATGCTCCTGTGAAACCCTATGGGGCAGTTCTACTCT
GTCCTGTGGGGTCACTAGGAGTCAGAATTGACTCGATAGCAATGGGTCCACACCAAAGAT
ACCTCTGAAGACTCTTCAAAAAAAAAAAAACTTCTTGTAATTTGAAAAGATGTTTGTACT
ACCCTGCTGGCGTAGTAGCTATATGCTACATCTGAGTCGGATCTGACTCGACGGCACTTG
GCACTTGGCTGGCTAACCAAAAAAGTCAGTGGTTCAAATCTGCCAAGCACTCCTTGGAAA
CCCTACAGGGTAGTTCTACTCTGTCCTATGGAGTCGCTATGAGTTGGAACTGACTCAAAG
GCAGTGGGTTTTGTACTTTAGTCTGATGAGAAATTCTGTACACTCAGATTATCACAGAAC
ACTAGTATTATACTTTATCACCACAAAAAACCTCATATGTACAAGAAATCTTTTTCATGC
ATATTACCATGTTATCAGCCCACTCTTAATCACGAAATTTTCATCCAAGCTATACATTAT
CACTAGTTTCACTGCAGTGGTTTTGATTGAAATAAAATTCTATCTTGATTTAAAATCACA
GCAGACACGAGTTTTTAAGAGTTTGGTTAGAGGACAAAGAAATGATCACATTTGGAACCA
CTATCAATTAACCGAAACCCTGGTGGTGTGGCAGTTAAGTACTACCTGCGCTAACCAAAA
AGTCAACTGTTCAAACCTGCCAGGTGCTCCTCAGAAACCCTGTAGGCCAGTCTGACTCTG
TCCAACAGGGTTACTATGAGTAGGAATCAACTCCTCGGCAGTAGGTAGCAAATAACTTGT
AGCTGGTAAGAAACTTTCTGAAGGAACTTTGCAAAAACTGACTAAGCAATCTAAAATTAA
ACACGTCTTTTCTTACATCTAGTATAACAAAGCTAGGTAGCTATAGCTACACGTAAGCCT
TTTAAAGATCTTAACAAAACATATAAGCAGCATGTTAACAACCTGATTCTAGAATCTTAG
CGGGTCATCTGTACACAATTCTGACGTATTACCTTTGAAAAACAACAGTCAGATAATTGT
TTATATCTCCCTGAAGAAGCAGGTGAAAGTATACAAATGGGTACTACCACCATCGCTTTT
AACCAAAAACAGGACAGAAATGTTTTCACATACTACATAAAAACACACACCTGTAATGGC
GACGAGCAACTAATGCAGATGCCACTCGCCCTTCCCTTTCTCCTACACCACAATTGCCCA
GGAAATTGTTGCTATCCATGATTGCAAGTTCATGTAGAAAAAGTTCAAGGGTACTCTCCT
CCCAGCCATCCTCTGGACACTTGCCCTTAAAAAAAAAAAAAACTTTGTATAAGTTCCCCT
ACTTGGGTGTATTTTAAAACGCTTCAATGTGTATTTTGCCCTGATATCTGCTTTCTAAAA
TTAACACCTAACAGCAGCACTATGAACAGGCCTCAAGTGTAAAAACAGTTTGTGTCCCAT
TTGATTATAATTATCTACAGAGTGAAAGAAGTGCGGATAAACGCCGGTGATGCGATTACT
CAGATTTCAAGGCTTCTGTAAATTAAAGTAACTCAAAACCTTCACTGGTGTTTGTTTCAT
TCCATATCCTTAACGAAGACTCTTCAAGGTGTTGTAACCAGGCGATGTCAAAAGAACGTA
ATTAAAATTCAGGAATGCCGGCAGTAGTTACACACGGCAGCACTTAGTTCAGATTAGTAG
GCAGTGGTTTATTTACAAACGCAACGTGATCCCTGAGTCCCCGGGAGTGACGGTATATAG
AAAGAGCGAACTTTGCCCTTGCCGCAAACAGAACAATAAAATAACTAAGCTGTTTCCTCA
TTTCTGCATCCCGAAGTTAGAAAACGCAGAGCACGAGACTTCGATCATAAATACCCCCAA
TTAACACCCCGGAGTTTCGCTGGCTTTGACAAGGATGAACGCAACTAAGCGCTGCTAGTC
AGTGTAGCAAAGCCGAGCTGAAAAAAAAAAAAAAAAAAACTCTGGAGACATATCTGAAGC
CAAGAGCAGAGCTTCGGCGGGACCCTGCACAAGCTGAAGGCTGGAGTCGCGGCGGCTCGG
CAGAAGACCGACAACTCGGTACCTTCTCCAGAAGCAGCCGTATGAGGTGCTCATGCGAGC
GGCGGGCCTCACAACCCTGCCGCACGTAGGACGGAGACACCAGCCGCTCGCCGGCCGCGA
AACTCTCGAGATTCAT
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