SelenoDB
Release 2.0
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Transcript Report for SPT00002365_2.0
Identity
TranscriptSelenoprotein W (SelW)
SpeciesRattus norvegicus (Rat)
Transcript IDSPT00002365
Transcript release2.0
External IDNone
Gene SPG00002272_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002365_2.0 # Transcript # Selenoprotein W (SelW) # Rat (Rattus norvegicus) # Full length # Forward
ATGAATAACAAGGCGCGGAACCCCGCTCCCTCTTCAGTCCGGGCAAACACCCCGTCCCGG
ACACCCACTCCCGTCCGAACCGCGACCCCAGTCAGGGCCTCGACCCCGGCGCACAACCGG
TCTCCGGTCCGAACATCCATCCGGGTCCGGACTCCTGCTAACCCTGTTCCAATTCGGTTC
CCTACTCCAGCCCCAGCCCCTGCCCCAACTCCAACCCCAGCCCCAACTCCAGCCCCAGTC
CCGGCCGCAGCACCGGTGCGGACTCCAGCACCAGTCCGGGCCTCCATTCAAGGTCGGAGC
TTTCCCACGATCTCTCCAGTGAGATTCTTACGGAACTTGGCCTTGCCCGCGGCACAGCCC
CTTTCTTCCGGGGGTGCTGGCTCTCTCTCAAAGGATCTCACGCTCGCTCAAAAGCAGAAG
CCCTCGATCCACAGCCTAGCGGAGGCCATCCAGGGGCCCTTTCCAGTGCTCACTCCCTCG
GCCTCCTCGGAGACCCACGGCTCCATACCGGACCCCGCCCCTCCCACTGACTCCTTGGCT
TCCACTGCCATGGCCTCCAGTACCTTGGACCCCATTCCGGGCCCCAAACCTACACTAGAG
TTCTTGGCCTCCCCGCTGAAGGAAACCCCTGATTTGGGTAAGCTCTCCACAATTTCCCCA
GCACAGAACTTCGTTTCCACTAAGGAGGTCCCCTCCACCAGCGAGGACGTCCCAACGGCC
AACAGAATCTTGATCCGTGTGATGTACTGGTGAGGGGCTCTCCCTACCCTCGAAAGAACT
GGACCCGGCAGGTGCTGGAGTTCGGGGCATGTATGTGCAGGCCCGGGTGTGCGCGCTAGG
TAGGGAGGCAGATCCACAGAGTTCTGACTGCCACCGCTCTGTCCCTCTGAGATCAGAAAG
CTCTATTCAGTTTCCCACCCTGGCTCTCAGCGTCTTTCATTCACTCCCACCTACCCTTGC
GTTCCGCCTTTGATCTTTACTCTTTCGCTCGCTTTCATTTGCACATTTACTGACTTTAGG
CTTCATTCACTCCTCTCCCTTCAAACATCTGTATGAACGACTTGGCTGCTGCCCTTCGCT
TTTATTCATTCATTAGTGCGTTCCCCACCTGGCAGTCAGAATCATTCATTTAGCTGCTTG
AATCCTGCCTCTCAACTTCATGCATGCATTCACTCTTGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTGTTGGTTCATTTCTAAGGATGGGTAGA
AGTGCTAAGCTTCATCCACCCTCAACCATTCAACATCAGCATGATCAATGGCTCTAAACT
GTGTTCTCATTCATTGATTCATACACGCATTCACTGGTGATTCCTATGACTGGGAATCTG
TTCCCACTCCTCCCTTGGCTTCCCTAGCAGGCCAAGCAGTGCACAGCCTATGCCAACCTG
CAGAATTATGAGCAGAGAGGCACTTCCTGAGGAAGGAGGAGAGGCCGTCCATGTCCGAGC
TAAGCTGGGTGGTCAGGATGGTTTTGCTCCCTGGTGACCCCTGAGCCACCATTTCTCAGA
GAAGAGGAATGAGGCTGCTGAATGAAGAGTGGAAATGGAAGTGGGGGGTGGTGTTGGTGG
GGGGACATAGTGGGGCAGCCGGTGAACAAGTACAGAGGCTCTAGAGGCTGAAAGCAGCTC
TCAGTTGCTGCTTCAGGCTTATGAAGTGACCTGAGTGGAGTAGCACAGGTCAAGGCTGTC
TTCCTCATTGCTTCTGGAGAACTCCAGGCCCTTGACTCACACTCTTCCTCCTTCCTTTGG
CCCTGCCAGGGAACTTCCACCTGCTCATCTCCTGTCCCACAGTGTCTGTTTCTCTCTTCC
CAAGCTTTCTCTTCTCTTCTCTCTCCCTTCTTTCCCTCTCCAATCTTCTCTCTCCTCTTT
TCTCTCCTCTTCTTCCTCCTCTTCTCCCTATGTAGCCCTGGCTGTCTCAGAACACTCGCT
ATGTAGCTCAGGCTGACCTGGAATCCACAGAGCTCTGATTAAAGTATGGACCACACGCCT
GGCTCGACAGCTGTTTAGACACCCATCAGGTGTCTGTGGCACCAGGACAGGAGACTCCCG
TCCTGGTAGCTCTGACATGCTAGTGTGGAGGGGCAGGCAGGATGCACAGGAAGGCATCCA
GGAGGGTCACAGTGTCTACTGTGAGGGTCAAAAAGCCTCGCTGAGGTGACCTGAGGAAGG
GAGAGGACCCATGCACATCCTAGGGAGGAAGGAGCATTCTGCAACCACCTACCAGTACCA
AGGCCCCGAGGCAGCGCACACCTGCAGTGTTCAAAGACCAGCAAAGAGAGTTCTGGAGCT
GGGCAAGGTGGGGGACGGAGGAGGAGGGATGATGGGCACAGTTACGTGGGCACCCAGGAA
GGTGAGGAGGAGGAGGAGGATTTCTCCCTGAAATGGTACCATGGGAATGGGGGAGGTGTC
CAGGAAGGCAGGGATGGGGGCAGATTCAGACTCACTGCTGCTATAATGTCTCCCTTATTT
CTTTCCTGCCTCCCTTCCCCTGCTCTTTGCTTCCAGTGGCCTCTGAAGCTATGGCCTTCG
GGTGAGTAGTTTCTCCTTCAGAATGTAAGGGAGCAAATGATGCAAACACTGGAAGGTGGG
GGTCCCTGTTTCACTCCCATCACCCTGTGACTCCATAACCCCATCTCTTCCCTCTCAGTA
CATTCTACTGAAAAAGACCCTGGAGCATCAATTTCCAAACCTTCTGGAGTTTGTAAGTGT
ACCGGTAACCCTGCGGGGGAAGGAGTGGTCAGGGTTCCCAGACCCCTGAGAAATCTTCAG
TCTCCTCCACCCACAACATTCTCTTGCCAGGAGGAGGAAAGAGCTACCCAGGTTACAGGG
GAGTTTGAAGTGTTTGTGGATGGGAAATTGATCCATTCCAAGAAGGTGATTCTGGGATCA
GAGGGTGGAGAAGGGGTACTGGGAGGTTGAGTCACATCTGGACTCTTTCTCCTTCATACC
CAGAAAGGCGATGGCTTTGTGGATGAGACTAGTCTGAAGAAACTTGTGGGTGCTATTGAT
GAAGAGATCAAGAAAAGGTAGCAGCAATAGTGGAGCTGGACATGAGTGAGGTGCAATGGA
GGGTCATGAGGAAGCGTGCAAGTAAGTGAATAGGGGCAGGGCAATATCTAGGATCTACTA
CAGCTCAGCTGACCTTCACCCTCAAAACCATGGAACATCACTGCTGTTATTTTTATTTTA
TATTGACAGAGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGGNNANAANNATCNATAACATGTANGNGGAAGTTAGGNNGANNACACAGT
GTAGTTTCTGGGGATTGAACTCAGATCATCAAACTTGGCAACAAACTCCTCTACTCAATG
AGCATTATTGCTGCTCCCCTATCCCCCACTTGAGGCAGTCTTATTGTAGAGCCCAGGCTG
TCCTAGAAGCCTTTAAGTAGTTCAGGCTGCCCTTGAACTCCCAGCAATCCCCTTGCCTTA
GCTTCTTTTTTTTTTTAATTAATTAATTTATTTTATGTATGTGAGTACATTATGGCTGTC
TTCAGACACACCAGAAGAGGGCACCAGATCTCATTACAGATGGCTGTGAGCCTCCATGTG
GTTGCTGGGAATTGAACTCAGGACCTCTGAAAGAGCAGTCAGTGCTCTTAACCAGTGAGC
CATCTCTCCAGTACTTGGCTCAGCTTCTTTTTCTTTTTCTTTTTTTTTTTAAAGATTTAT
CTATTTATTATATATAAGCACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGTCATCAG
ATCTTATTACAGATGGTTGCGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTC
TGGAAGAGCAATCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTTGGCTCAGCTT
CTTTTTTTGGTTCTTTTTTTTTTTTTTTTTTTTTTTTCCGGAGCTGGGGACCGAACCCAG
GGCCTTGTGCTTCCTAGGTAAGCGCTCTGCCACTGAGCTAAATCCCCAGCCCCTTGGCTC
AGCTTCTTAAGTGTTGGGATTTACACGTCTGAGCACCCCTCAACTCCCCCCCCCACTTTT
GAGACAGAGTCTTACATAACCCAGGATAGCCTCAAACTTGTTATGGGGCTGAGAATGACC
TTCAACTACAGATCCACCTGCCTCTACCTTCCAGTTGCTGGGGATTACAGGTGTGATCAC
CATCCACAGATTCTTAGGTGTTGTGGTGGAAGCCAGAGCCTGCATATGCTAGGCAGCCAT
TTTACCAACTGCACCACTCCTCGCACCCTCTTCTCATTCCTCCCATTTTCTTTCGGTGCT
GGAGATTGAACTGTGTAGAGTAACTTTTATTCTCCTGATGTAATTGTCATCTCGGAGACT
TCCTCCTCCATCTGCTAACCTAGGCCTAGTCCTGGAAACTTCTAGCCTCTGTACGATCTT
ATCTGAGCCTAGAATGTTTTCAGCCTGAGACTTGCTGCTGAGTAAGCTCACCCTTTCTTG
TTCTTCCTGAACTTTGGCTGGCTGGTTCAACTCAAACTCCTCTCCAAGCTGATTCAATCT
GTCTTCTCTCAGTTTCTCACTGAATTGCTCTGCTTGGCCTCGTACTAACTTAGGGAATCT
GTTCTAATCATCTGGATCCTTCTCATTCTCCAACTCATTCTGTCTTCATCTGTGTCTAGC
TTGTTCTCTCTCTGCAACCTGCCTCTGTACAACTGTCTCAGTAAAACTCCTCCCTTTCTA
AATTTTTCTCTCTGCATTGATCTCTTAGGTAGCTTCCCTTTCCCCTCTCTCCTCCTGAGA
GGTGGGCAGATCCTGTTCTGTCAATTATTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTG
GTTTTTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCGCT
CAACCACTGAGCTAAATCCCCAACCCCCTGTCAAATATTTCTGATTCATCACTTTGTCTG
CCACTCGATTAGACATCGCTTTCAAACATGGGTGCTTCTTTCTACAAACTAACTTTACCT
TCATAGTTTGGGATTAAAGGTGTGTACTAAGAGTTGAGCCAGACCACAGCTAGAAACAGA
TTTTTTCAGTAAATGACACAATTTCAGAACTCACAATGTGATCAAATATCTTGCATCAGA
CCTGGGCTGAAGCCCACTCATGGGAGGTGAGAGCTTTACCGTGGAGTTGCATCCACTTTT
TCTCCTGTCTTATTATTATTTTGAGATAGGGTGTAACAGCACATGCCTGTAACCCCAGTA
CTCAGGAGGCTGAGGCAGGGGGATTGAGGTGAGTTTGAGGCCATCCTGGACTGCATAGAT
AGACCCTGTCTCAAAACAAAAGACTAACCAAAGCTAAAATCATTAAAAACCCAGTTTGTA
GTTGCCACAACACACTTCAACTCAACAGTGAGATGTNGCTAGTGTACTGGGCTACGTTGA
TCTGCATTGGATTGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
AAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAGAGATACTAAAAGATGTCTGCAATGAC
TTATATACCATCGATGCTTGGATTTTCTCCTTCAACTTGTGAGCATGAGCCGAAGAGATT
TAGTCTCCTAAGCAGACATTGATGAGCCACACCCCCAGCCCCTCATTGGGGGATTCTAGG
GCTCTACCACTGAGCCACGCCCCCCGCCCCTCACTGGGGGATTCTAGGCAGGGGCTCTAC
CACTGAGCCACGCCCCCAGCCCCTCACTGGTGCACTCCACTTCTGAGCCTGATACGGAAA
GTTTTTGTTTCTAGATTTTGGGAGTTAATAATTATTTCAAGTTGGCCTAAAATTGTAGAA
TATCTTGTCTCAGCCACCTAAATGCTGGGATTACAGGTGTGGGCTACCACCTGGCTCTAA
GAGAAAAGTTTTAAAAATGGAAAGATGAGGCCATTATGATACCTGAAAAACACGTCTTCA
GATTATCTAGTATCCAGTCAAGGATCTCAAAAATATCCTCCTTTTTTTTGTTTGATTTTT
GTTTTTTTTACAGCTGAGCATGGTGGCTCATACTTGTAATCCCACTTACAAGCACTAGGT
AAACTGAGGCAGGAGGAGGCTCACTGGGAGTGTGAGGACAACATGGACTCCTCAGAGCAT
GTCTTAAGAAACCAAAAGACTGGGGAGGCTAAGGGGCTAGCTCAGTGAGTAAGAGCACTG
GCTGTGAAGAGAGAGGAGCTGAGTTCAAATTCACAGCACTTGGGTATAAAATTGGGCATG
TCCACACATTCTTGTGACTCCAGTGTTTTGAGGCAGAAACTATGTGAGTCCCAGGGTCTC
ACTGCCAAGTCAGTTTAACTGAATCTGTGTTAAAGGGGCTGGAGAGATGACTCAGGTGCT
AAGAGCACTGACTGGGGGTTGGGGATTTAGCTCAGTGGTAGAGTGCTTGCCCAGCAAGCG
CAAGGCCATGGGTTCGGTCCCCAGCTCCGGGGGAAAAAAAAAAAAAGCACTTACTGCTCT
TGCAGTGGTCCTGAGTTCAGTTCCCAGCACCCACAGGGTAGCTCACAGCCATCTATAACT
CTGGTTCCAGGCAATCAAACACCTTCTGACCTCTTCATGCTCTAGGCGTGTACATGGTAT
ACACAGAATTATATGCTGGCAAGCACTCCTACTTATAAAATAAACATAAATAAACCTTAA
CAGAAAATAAGTTGGAGTGTGATAAAAGATACTTACCATCTGCCTCTGGCCTCCACACAT
ATGTGTATAGGCACACAACACATGCACCCACATACACAAGTGCACATAGGCCACACATAA
CAACCACAAAAGTGCTGGCCATGTAGCTCAGAGGTTAACATACACATATACATATACCTC
ACATGAAGCCCTATAGAAATACCAATATTTTAACAGGGAATTGTTACTATTTTGTTTTCC
TTCTCTCCCTGTCTCAGGAACCTCAGCGGGATGATGAGAAGGGCTGAAATGCTGCCAAAC
CAGGTCCTTTTCTGATGGTGGCTGGGGCTT
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