SelenoDB
Release 2.0
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Transcript Report for SPT00002424_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesSarcophilus harrisii (Tasmanian devil)
Transcript IDSPT00002424
Transcript release2.0
External IDNone
Gene SPG00002331_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002424_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Tasmanian devil (Sarcophilus harrisii) # Full length # Forward
ATCCCTGCTGGCTACTGCTTTGTGGAGTTTGCCGATCTGGCCACTGCTGAGAAGTGTTTG
CATAAAATAAATGGAAAACCCCTCCCCGGAGCCACACCAGTAAGGACCATGAGTTTGTCC
CAGGAGCCTGAGTGAGACTCAAGGTCCCAGGATAGACATGACCCATAGGCCAGGATGTGT
GGTGCCCCCAAGGGCATCTCGGGCATCTTAGCACTGCCCTGTGAGGGTGCTCCAGAAGAC
CCACCTGGCCCACCAGGAAGTGGATAAGCTTTAGAGGGGCCTGAGGCTCAGAGAGGTTAG
CCAACTTCTCTGGGGCCACACAGTAAGTAAGTGCTGGAGGAGGGATCCCAACCCTGGACC
CCACACTTGGGCGCCCACTCCTGCTGGCAGCTGTTGACCATAGGTGGCGACAGCAAGGAT
GCTGAGGAAGGGCTTTCTCTCTGTGATCTCCTTTGTTCCTCACAGCAACCCTCTAGGGTA
GGGAGTGCAAGTGTCATTATTCCCATTTTTCAGATGATGAAACTGAGGCTCAGAGAGGTT
TACTGACTTGCCTAAGGTCACCTAGCTTGTAAGTGGTGGAGCTGGAACTTGAACCCAGGT
CTCCTGACTCCCCAGTCCCGGGTTCTTTCCACTGCACCACCCCACGCTGTACCGAGTTGG
CACACCAGTGAGTACATCATGGTTATTTCATGCCTCTTCTGAATGTTGTTTGGCTCTAGA
GTGACCCATTCCTGACCCTGCCCTATTGTTTCAGGCAAAACGCTTTAAACTGAACTACGC
CACTTATGGGAAACAACCCGATAACAGGTGAGTTGGGAGAGACCCCAGAACACCCCCTGT
TCTGGTGGCCACAGGGTGACTGAGCCCTAGGTGATCTCCAGCTGGGCCATGTCCAGTCAT
GGTCCATATTTTCTTTTTGTATCCCTTCATGCAAAGACACACACACACACAGAGATACCG
AGCAAATGGGAGGAGGGCATAACATGGTCTCTTTCTTAATATAAATTTTAAAAGAGGCCA
TAGCTTTTAGAACTCCTTTTGGGCTCAGGATCCCTGAGTCATTCCCCTTTGGAACCCTGC
CAAGTTATCCATAACCACACTAGTCCACGTGGGGTTACCAGTCCTGTGCGTCCCAGGGAT
GACCATGACATCAGTGACAGCTGTGACTGATTCTGAGCAGAGGATGGGTGTCCTCAATGA
CCAGGGGAGTCTTCCCTCTAGGCCCAGAAGAAAGGGAACACTGGAATGGATTAGCTAAAC
AAGGTTCTTCTGAGCAATTCTCCTGCTCTTGGTCTCTGAGTTGTGTTGTTCTCTCTCCCT
CAGCCCCGAGTACTCACTCTTTGTGAGGGACCTCAGCCCAGACGTGGATGATGGCATGCT
CTACGAATTCTTTGTTAAAGTTTACCCCTCGTGTCGAGGAGGCAAGGTGGTCCTGGACCA
GGCAGGAATCTCTAAGTAAGGCTGCCCACCTCCTTCCAGCCCTGTGTCCTTCCCCTTTGG
GAGAGCTGTCAGAATTTTGGAGAGAGTTAATAGGAGAGTCAGAAGGGGGCTCAGGGGGCT
GAACACAGGTTCCTGCAGTAAGGGCTTTCAGCCTCTGAGCCAGGAAGGGGTAACAAGGAT
ACACAGGGCTCCGTGTGAAGCACCAGACTCCATAGGGCTTTTATAGATGTAACCTCCTTG
ATTTGCTGAGTTTAATCAAATGGATTTCACAGAATGTCAGAGCTGGGAGGAGCTCCACCT
GGAAGGCTCCAGGTGGTATATTCTGAGCCTTCATTTTACAGGGGAAATAGGGAAATCAAA
GTTCCTCAAAGTCACACAGTGAGCCAGCAGAACCGAGTCTTGGTTTCTTAGCTTGCAGTA
CATGGTGGTTGGCCTTTTTCATTGCTTCCCTGGTTCCCTTCATATCCCAAAGTTAACCCC
ACTAAATTGTGAGGCTGCTCTAAGATTGTGCTGATGATGTCTTCCTCTAGATGTCATTCC
TCTTGTCTTTAATATGAGAAAAGTGATCTCTTTAAGTTTCCTTCCACGTCCAATATCCTG
GGACTCTGCACCTCAGTTTTTCCTCAACCTATTATTTACCCCTTCTGGGCCTCAGTTTCC
CCTTCTGATAAAAACTCATGTTAAGAAAGTCCTGGAGAGAGAGAAGGTCAACCTGTTCTT
ATGACATGTGTTGGGCTGTGGAATTTTGGGGCACTTGAAACATCCCTTCATTCTGAAAAT
CTCTATCCTGGCTTGCCACAATTAAAGTGGGGATTGCAGGCCACTGGCTCTAGAGCAAGA
GGAATGCACTAAAGCCTCAGGACAGAAATCTTCAAAGAGATGAGCTGCAGTCCTAGCCCT
CCCTTTGTAGAGTCATTCTTGCTGTGCATCCTCGGAGTCCTCCTTTTTTGGTCGGCTCCC
ATACCCTGAAGGGGTTGCATGAGCTTGAGAGCTAGCTGAGTCCTGCTTAATGTCTATCCA
CACTCTGGGCTATCATACAGATATCTGTACCTGGCTTGAACCCATTTTCCTTGGGAGCAC
AGCTCTTGGTTGGTTGGTTCTGGTGTGTTAGAGGTTCCCCACAGGTTCAGGTCCAAGGCT
ACATTTAGTATGATGGCCATAGTGAGCATTTTTAGAAGTGTATCTTGTGTCCCCTCATTC
ATTTATTCAGTGAGAATTTGTGCCCCTCACTCTGTGTTAGGCCTTATGGGAATACAGAAA
AGTAGAAGACATTTGAAATGGTTAAAAAGTGCTTGATCAGGGGCAAGAAGGTCACAAGGC
AGTGTGAGACACAGTGCCCAGGGAGAGGGGCAGGGAGCTAGTGCTGTGATGTCAGAGAAG
CAGAGTTCTGTACCCAGAAGCCAGAAGGGCTCCTTGGGGGGGCTGGGCTTTGAACTCGGA
TATGAAGGTTGAGAAACATGTGGCTAAATAGGTGGGCAGAGGCCCTTCCAGGGAGGGTGG
CTAGATGACGGGGGAAGGCCAGGCTAGGAGGCAAAGCATGAGGGAAGACTGAAAAGAGAT
TCTGAGTTCTTCCAGGTCCCAGCTCAGGAATCCTCCGTGGTTTTGACAGTCCTGCTTATT
TCCCTGGGAGGATCAGCATGGCCCAGTGTGACCCCGGGACTGAGCTGACACTTCTTTCTC
CAGGGGTTATGGTTTCGTGAAATTCACAGATGAGCTGGAACAGAAACGGGCCCTGACTGA
GTGCCAAGGGGCAGTGGGGCTGGGCTCGAAGCCAGTGCGCCTGAGCGTGGCTATTCCCAA
AGCGTAAGTCCAGAGCCTGAGGGAGGGGTCCTGGCATTCCTCTCAGCTAGGGAGGGACCT
CCAAAGTCATTTAGATCCACAGCCCCCTCCTTTCAAAATGAGATCACACAGGTAGGCAAG
TAAGTGGCAGAGGCCAGATTTGAACCTGGGCCCTGCAAAGCCAAAGCGGACCCTCGTGCT
GTACCCTATACCCCACTGACTGGCTGCAAGGGTCTTCATTGCTCTGAGGAGTGCCTTCCT
GCACTCAAGGCTGTGGGAATACTAGAAGCTCTAAACTCTTACTATTCAGAACCAGCCCGA
GATTTGGTGGTGGAAGCCTAAGCCTGGGTTTTGGAAGGAGAAGGGGTCCTGGCTGCCTGG
TCAGCCTGAGGGACACTCACCTTCCTGGATCCCAGTGCCCTCCTTTCCCTTTCCTCCTCA
CCAGGCTTATTAGGCAGCAGAGCACAAGGGTGCTGATTCTTCTCCATCTCAGGTGGTGGA
TAGGGCTGGGGGTGGGGTGCTGCCTTCCTTCCTGGGCATTTGTTTCTGACCTGCCTGGGC
AACAGACTTCCAGCCTGGTAGAGGAAGGGCTTTTTGGTAAACAAGGACTTCCAGAGCTGA
CCCAGCTGGAGGAATGGCTTGAAACATTTGAAGGAAAGGAAAGAGCAGTTAGCCAGGATT
CATCCTTGACCACTGTATGACCTTGCACAGGTGTCCATCCTCAAGGTCTTAGATGCTTCA
TTCTCAGATTGAAAGGGCTAGCCTCCATGACCTCGGAGGTCCTTTCTCAGACACTGGCCT
GGTGGTCTTCTTAAGGAATGTCCCCTGGGGCATCCTGGCCTGGAAGAGGTCCAGAGCCGG
GCCCCGCAATGACAGAGGCTTGTCAGCTTTGTCCATCCCTGTGCCCTAAGGAACAGAGTG
AAGCCTCTGGAGTACAGCCAGATGTACAGCTACAGCCTCAACCAGTATTACCAGCAGTAC
CAGAACTACTACGCACAGTGGGGCTATGACCAGAACACAGGCAGCTACAGCTACAGCTAT
CCCCAGTACGGCTACACCCAGAGCACCATGCAGGTACCTCTGGCTGGGGTGGGGGGGAGG
AAGGAGCCCATCAGCCAGCCCTGGGCGGGGAACTGGTGGGAGGACGGGGAGGTCTCTGCA
GAGAAGCAGATGACTACATAGCAGGGGGTAAGAAAACCTGTTTCAGGACAGAACAGGCCA
TCTTGTTCTCTTCCGGGTGACCACATGTGACTCCTGCATCTTAAGTGGTTGTCTTAATTT
ACTTTTCACTGGCAACATAAATGTGGTCCAAAGTTTCTTTAATAAAGTTAGAATTGACAA
TAGTGTTGATGATGAGGTCCAGTCTTGAAGGGTCCCATTTCATTAGCTGTGGTTGTGGAT
TCCTGGGGGCCCTCACCTGCCTCTCCCCTCTCCCTTTGACAGACATACGAAGAAGTCGGT
GACGATGCATTAGAAGGTAAGGTACTTCTTTCCCTGAGATGCTTGCTCCTTTCTGACTGA
GGCTCTTCTGCAGCCTCAACTCTGTTCTTCTTTTCTCTTCTCTGAAGTCAAGTTAAACAT
CTAGTGGAGTCAGAATTTGAACTCAGGTTTCCTGACTCCAGGACCCTACACTGTGCTACC
CACTCCTTGTGCTTACTTCATTGGTGTTCGGCTGAAGGAATGAAACAGCTGGGGACCCCA
AACCTTAAGTTTGTCCTTTCTTGGTGATGGCCATAAAGCTGGAGAGCTGAGAAGGCCCAC
ACTCCTAACACAGCTGCTCCTAGCTGAGGCCCAAGAAAGCCAAACTCACAAACTCTGCAG
GCTTCTCAAGGCCTCTCCCCACTTGCCTGCTAAAGGTATGGGCCCCAGACAGCTCCTGCC
AAACATGATCAAAGACCAACAACACAGTGACAGGGTCTGACAGTGTCTGCAGCATTCTTC
TGAAGTGCCCCCCCCCCACTTCTACCCATCACAGCAGGGGAAGCGTGAGATTGGTCTTTA
TAGTTATTTAGTTTTGAACTTCCTTTTAGTGTTTTTTACTTAATATTATTTTGGTTATGT
GTGTATGTCATTCTCCTGGTTGTTCTTTCTTTAAAGTTTCATGAACAAGTCTCAGATTTT
ATTTCATTCAATTATCAAACTTTCCCACCCCCACCATCCACACACACAAAGGGAAAAAGT
ACCAAAAACCTTTGTTTTTTTTTGTTTTTTTTGTTTTTTTTTTCAAAAACCTTTGTTACA
AGTAAGCACAATTTGACAAAATGAATTCTCGTATTGGCCATGTCTACAAATGTGGATCCC
ATTATGCATCTTCTCTCCTCTCCCTAAGAAGGCTGGCATTGTCCTCACCATTGGTCCTCT
CCAGTTATGTTGATTGAGAGTTCTTAAGAGTGACATACACACAGTAACATGTTTTCTTAA
GAAGGCAAGTGTGGGGTTAACTGAGTAATACAGTGATTTAGAGCTCTGGCCTTTGAGTCA
GGAGGACCTGAATTCAAATCCTCAAACATGATACTTAGTAGCTATGTGATCCTGGGCAAG
TTACATAATCCCAGTTACCTCACTCAAAAAACCAAAAATGTATACAATGTGCCAGGTATA
TTATTGGCCTTTCCCTCAAAGAGAAGTAAATTTAAAGTAATTTCAAGAGGGAGCGAGAGT
GCTTCCTCTTGAAACCTCCTGAAAGTGGCAGCCCAAGGAATCTAGGGATTTAAGAATGTG
ACTGAGGCAGGAAGTATTCCCAATCGCAAGGACTTGCCCGCCATTACCTTCTGCTCCTGA
GACAATACTTGTAAAGCACTTTGTGTGCTTTGGAGCTAGTTATTCTTCCTCCCCACTCAT
CAAATGGCTTTCATCCCTTCTGCATAGGGGCTGCCCTGGCTTTGGGTACTTTGGGGAATG
TAAAGCCTGTCCTTGGATGTCCAGTCTCCTAAATGTGGAGCCTGGCTGGAAGCAGAGGTG
GCTTCTGGGTTAGGCCCTGTCCTTTGGCTGCTCAGTGACCTTTGGATAAGACACTTCTCT
CTGCTGCAGTTTGTTTCTTCTAGCTGTGAGAGCTTGCTTTGCTTACTTCCTCATTCTCAC
ACTACTTCCCAGAATTCTAGCTATCCTGCTACATAGGAGAACATTAAGAAAGTACATATT
GGGGCAGCTAGGTGGCACAGTGGATAGAGCATTAGCCCTGAGGTCAGGAGGCCCCGAGTT
CAAATCTAGCTTCAGATACTTAACACTTCCTAGCTGTATGATGCTGGGCAAGTCACTTAA
CCCCAATTGCCTCAGGGGGAGAAAAAATGTACATATTGTATCCATTGTCTATGAAAAAAA
ATTTTTTTTTATGTTAATTCCTCTACAACCCTATGTACTCCCACTCCAGAGTAATGCCCT
CTTGAAGAGCTATGAGGAAAAGTGAATGCTTGTAGGGCAAAGCTCACAGCTTTGAGAGTG
ACCAGAGCTGGCAGTTTAACCACCCAATTGACCGAGAAATGTATTGAGTACCAGCTTTGT
GCAGAGACTTGGGGGACATGAAGATGTCCTGCTTTCGGGATGCTCATGGTGTAGATGAAT
TTTTGTTGCTGTGAATAGACTGGGATAGCTACTGGGACTACTGGGAATCATCCAACCCAG
GCCCTCATTTGAAGGTTGAAGGTCCCTGGGGAACTTAAGTCATTTGCAGTGATACTGAAT
GACTTAGGAGATGAGCTGGACAGTAACTTGAGGCCTTTGACTCCCTGGCATCAAGTTTAA
AGTGCCTACTGTATACTGGACAGTGAGGATACAGAGACTCTGTTAGGGAAACTGCCTGCT
TGTCTACATCTAAGTGCACACAAAACGTGCCAAATCTACAAGGCAAGTTTAGAGCAGGGC
AGGGCCGGACAGGGAGGTCTGGAGCCCAGAGGTGTAAGGAGTTAGTGGACTCCAGGCACT
GGTAACATTTAACTTCTGTTACACTACTAGCACTTAAAAGATGGATCACTGCATGTTTCG
CCCAGCTCCCAAGTATACTTGCTTGGTGACAACAGGTAAAAGACTGTAGGGGTTAGTGTG
GTTTCATAGGAAGGTTAGGCTCAGGGTCTACCACCTCCTGTCTTATAAAGATGTGGACCT
GAATTGGCAGTCAGTCACTTGGGGATGCCCTCTTCCAGTGAAATCATGGGTCCGGTCCAA
TTGGCTCTCTGTAATACTCCTGATGCATTTTCTTTCTTTTTTTTTTTATCATAGCTTTTT
ATTTACAAGATATATGCATGGGTAATTTTTCAGCATTGATAATTGCAAAACCTTGTTCCA
ATTTTCCCCGCCTTCCTCCACCTCTCCCCCAGATGGCAGGTTGACCAATACATGTTAAAT
ATGTTAGAGTATAAGTTAAATACAACATATGTATACATGTCCATAGTTATTTTGCTGTAC
AAAAAGAATCAAGACTTTGAAATAGTGTACAATTAGCCTGTGAAGGAAATAAAAAATGCA
GACAAAAAGGTATTGGGAATTCTGTGTAGTGGTCCTGATGCATTTTCAGTCCCTTCCCTC
AGCATCCCATCATTCCTATTCATTTTTTTCATGTGCAGTTTTTTCTTTTTTAAACTTTAA
AGGTTGCTTATTGTATGTGCTTCATTATTCACTTAAAAATGATGTCCCAACCTAGGTAAC
AGGTTAATGCAGTGGACAGAGCATGGGTCTTGGAGCCAGGAAGACTAGAATTCAATTCTA
GCCTCACTATAGTCACTTGGTTACTCTGAGGGCAGGACACTTATCTGGATTCAGTTTCCT
CAGTTGTATAGAGGATGATAACAGTTCCTATTGTACAAGATGGTGTAAATATCAAGTGAG
ACATTCCCAAAGCACAAGTGCTTCTCACAAAGTACCTGATACTTTCCCCCATGTCAAGCC
TAGAACCTGTCTACTAGATTAGGAAATGTTGGGTCTTGCCTTTATTTGCAATTATCACTT
ACACATGAAGACAATGTCCCATTCACATGCTCTTCCTCTTGCCTGTTTAGACCCAACACC
CCAGCTGGACGTGAATGAAGCCAACAGGGAATTCATGGAACAGAGTGAAGAGCTCTATGA
TGCCATGATGAACTGTCACTGGCAGCCTTTGGACACTGTGTCATCAGAGATCCCTCCTGT
GATG
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