SelenoDB
Release 2.0
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Transcript Report for SPT00002441_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesSorex araneus (Shrew)
Transcript IDSPT00002441
Transcript release2.0
External IDNone
Gene SPG00002348_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002441_2.0 # Transcript # Selenoprotein O (SelO) # Shrew (Sorex araneus) # Full length # Forward
CAGGTGAGCCGGCGCACAGCCCGCATGGTGGCGGAGTGGCAGTGTGTGGGCTTCTGCCAC
GGCGTCCTCAACACCGACAACATGAGCATCGTGGGGCTCACCATCGACTACGGGCCCTTT
GGCTTCATGGACCGGTGAGCAGCCCTGCAGTTCTGGGGCCTGGGCTAGAGTCCAGCAGGA
AGGACACTGCCTTGCACACAGCTGACCTGGCCGTCCCGAGGGCCCGCAGGGCTGGGGTAG
GGCCCTGGGGGGCCAGTTCTCAAGCAAGTCAGAGCACCTTCCAGACACCACACGGTCCCC
GGCCCCAGCCTGGCTCGGTGTGGTCCCCAGAAGAGGGGGCCCGGGGGGCCTGAGCTCAGG
AGGCCACGAAGGTCCCCCCAGGACCAGCTGCAGTGGCTCTCGCCCCTGTGCAGGTATGAC
CCCGAGCACGTGTGCAACGCCTCTGACGGGGCAGGGCGCTACGCGTACAACAAGCAGCCT
GAGGTGTGCCGCTGGAACCTGCAGAAGCTGGCCGAGGCCCTGGAGCCCGAACTGCCCCGA
GAGCTGGCCGAGGCCAGCCTGGACGAAGCCTTCGACGCCGAGTTCCAGAAACACTACCTG
TGGAAGATGCGCCGCAAGCTGGGCCTGGTGAGCACGGAGCAGGAGGACGATGGCGCGCTG
GTGGCCAGGCTCCTGGAGACCATGCACCTGACCGGTGAGCAGAGCCCGGCCAGCGTGGCC
AGCACCTCCTGGGATGCCGGGTTTTTGTTTTTTATTTTTTGCTTTTTGGGTCACACCTGG
CGATGCACAGGGATTACTCCTGGCTGTGCACTCAGGAACCACCCCTGGCGGTGCTCAGGG
GACCATATGGGATGCTGGGATTCAAACCCGGGTCGGCCGTGTGCAAGGCAAATGCCCTCC
CCGCTGTGCTATCACTCCAGCCCCGAGATGCCGTTTCTTTTCCAATCAGCTTTTTTGCTT
TTTGGGTCACACCCTGCAGTGCACAGGGTCATTCCTGGTGGGCTCGGGAAATGAGAGTTG
GAGATTGAACCTGGGCGGGCTGTGTGCACGGTTTTCTAGGATCTTTCCTAGTTTACTGGT
ATATTTGCAAGGTTGCTCAGAGCCTTGGAGCCTTTTAGAAAGTCACCTGTTCCCACTTTC
ACCTGATCTTGGTTGAGTCTTTTAAGTAACTTTTAATTTGTTTTATATTTTGGCCACACC
TGGCATGCTAGGGGCTTCCTCCTGGCTCTGTACTCAGGAATCTCACCTGAGTGGACTCAG
GGAACCGTATGTGGCATTAGGGATCAAACCTGGGCTGGCTGCACGCAAGGCAAGCACCTA
CCCGCGGTGCTGTCGCTCCAGCCCCAGGATTATCTAATTTTTCTATGAAAATGGCTCCTT
CCTCTCTATTGCAGGTTTTTTTTTTTTAATGCCTCATAATCGACTTTTTACTTATTATGC
CTTTTTTTGAGGGGGGTCACACCGGGCAGTGCTCAGGGTTTCTTCCTGGCAGTGCTTGAA
GGACCATATGGGATCCCGGGGATTGAACCTGGGTCGGTCGCGTGCAAGGCAAAGGCCCTC
CTCACTGTGCTATCCCTCTGGCCCCATTTTGGCCCTTCTTCATTGGACGGTTGACCCGAG
ATGCTATTACTGGGCTCAATGCCCTCGTTTCACCAGAGGTGGCGCTGTCCACACCCAGCT
CGTCATTCTTGTCAGTTTTGGGGAACTGCTCTGTTTCAGACCCTAGTATTTGGGGCTTCT
CTTGCCATTTCTTTAGACCTCTCCTCATGGGGAAGGGTTTGGGGGAATGTGACTCTCCAT
GGTTCTGATTTCCAGCTTCATTCTGTTGTGGTTGGAGAAGAGCCACATTTCATGGGGGGC
CGTCCTGGGACAGAGCCCCAGATTCTGCAGGCAGACACTCTTAGGTGGGGGGGGGTTGTG
TGTGTGTGTCCCTGTGATACACCCCATGCCCCATGGTGGGGGGGTGTGGTGTTGTGTGCG
TGCCATGGGCCCTGTGACACAGCCCACGTCCTGCCTTCCAGCATTCTGGGTCCTTCCAGC
TGCTCCAGGGTGTCTGGAGCACAGGGAGGAGGACGCAGCCCCGCTTCCTTCCCGCTTCCT
GCCTTAGTCCTCGGGCCGCTCCTCTCTGCACTGGGCTGTACACCATTCTGTCCCGAGTGT
GGGCCCGTCCCTGGGCTGTCACCGGCTCTCTGCTGCAGGTGCCGACTTCACCAACACCTT
CTCCCTGCTGCGCACCTTCCCCACGGACCCCGAGTCTCCAGACCTGGAGGAGTTCCTGGC
TGCCCTGGCCATGCAGTGTGCCACCCTGGATGAGCTGAGGATGGCTTTCCGGCCCCGGAT
GGACCCCCGGTGGGTGCCCGGCCTGCCACGAGGGTCCGAGCCCACAGCCCGGGTGTGAGG
GGGACCAGTGGTGACCCGCCCACTCTGCAGGCAGCTCTCCATGATGCTGACACTGGCACA
GTCCAACCCGCAGCTGCTGGCACTCATCGGCAGCAGCCGGGCGACCCTCGCCAAGGAGCT
GGAGCGCGTGGAGCAGCAGTCCCGGCTGGAGCAGCTGAGCCCCGAGGAGCTGCTGAGCGG
GAACCGGGAGCGCTGGACCCACTGGCTGGCCGAGTACAGGTACAGTACGGCCCGGCCCGG
CCTCCCCGCGGCCCAGCCTCTGGCGGCGGCTGCAGTGGAGCTGGGATGTGCTTGCAGAGC
CCGGCTGGAGAAGGACAGGGCGGGAGCCAGTGATGCCGACAGCTGGCGGGCCGAGCACAC
GCGGGTCATGTGCGCCAGCAACCCCAAGTACGTGCTGCGGAACCACCTGGCGCAGAACGC
CATCGAGGCCGCCGAGAAGGGGGACTTCTCCGAG
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