SelenoDB
Release 2.0
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Transcript Report for SPT00002486_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesSus scrofa (Pig)
Transcript IDSPT00002486
Transcript release2.0
External IDNone
Gene SPG00002393_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002486_2.0 # Transcript # Selenoprotein M (SelM) # Pig (Sus scrofa) # Full length # Forward
ATGCACCTCCCGCCGCTTTCGCTGCCCCTGCTGCTGCTCCTCGCGGCACTCGCGGCAGCC
ACCACCACCTTCCGGCCCGACTGGAACCGTCTACAAGGCCTGGCCCGAGCCCGGGTAGAG
GTGAGTGCTCCGGCCCCCAGCCCAGAAATCACCGCCCCCAACCTTGCGGGTCCTCAGCGT
TGGAATCGCTAACTCTTCTGGCCCCAGGACCCTCCCGACTCCCACGTCTTCCTCGGCGCC
CGGGACTGTCGCTCCCGCTTCCCAGCCTTAGAACCCCCCAGCACCATTCATGGAAGCCTG
GAACACCCCTGATCTTGTGGCCTGGAAATCTGAACCCCTCCTTAGTTCCCCATCAGGCCT
GACATGGGCCCCAGACACATTGGACCTGTCCCCTAACTTCTCTGGCCCTATGACTCCCAG
ACGAGTCCAATTTCCCATCCCCCATCACTCCTCTTTTTCCTGGAATTCATCCCCACTCCA
GTTCCGGTTGGTCTCTCTCCCTTTGCCTGGGGGAGGGAAGACCTTATGGGAGCCTAAGCC
CCCATTCCCACTCCGCCCCCCATGCAAAACCCAGGAAAGGAGGCTGGGAATTTCCTTTAA
ACACTTACTGTGAAGTGTTCCCCCACCCTCTCCTGCCAAAGTCCCTGTTGGGTTGTGTGA
CGTGGATCATCACAGACCCTCTCTAGGCCTTAGTTTTCTCTCTGAAAAAAGATGGGGAGG
AGGAGGGAGGACTAGAATAGGTAGCCCTGCGGTATGGACTCCTGCTAGAAGGAAGCTCCA
CATCAGGGAGTACAGGGAGGGGTCCACCCCTCCCCCCTTATTGGGGAAGAGACCAGATGG
TCTGTAGGGCTGGGCCGCAGGCGACGGAGGGCCAGCTCCTCATGGGGTGAGGTAAGGAGC
AGATGGCAGGTGTCTCTAATGAGGCCCCCAGGACAGAGCTGTTTCCTTCTGGTCTGCCTC
CACCCAGAGGTTCTAGGGGCTAAAGACCCAGTTCTCTACTGCCTGAGGGGAAAAGGGTGC
TCATTTCTCTTGGGCATCAGGAGTGGGTCAGCAGTCAGTAAGATGTACAGGCAAGAGCCC
TAAGTCTGCTGCTAAGTGCTCTTCGGGTCTCTGGCCTTACTCCTTTTTCCTCTGGTGTCA
TTACGTCTCAGCTTCCCCATCTGTACGGAGTTCTCCCTTCTGCCCACAAGAGGCCTCATC
TCCACACCTTGGAACTGCTATTCAGGGAGTAATCCATAGCCCAACCCAAAGCTGAGCTGG
GGGATGAGGGTAAAATTAGGGTTGCGTGTAGATGTGAGGGCTCCTGATCTATCCCATTTT
GTTCCCCCTGCAGACCTGTGGGGGATGACAGCTGAATCGCCTCAAAGAGGTGAGTTTGGA
GGAAGGAGTCCCAGTGAGCCTCCTGGGGGGTGGGAAACATGGTCCCAATGACTGGGTGGG
GGAGGATCCTTTGGCAGGGAGTCAGGAGGTTGCACCTGACTAGCTGTGTGACCTCATTTG
GCTTGTGTTCTGTTGGTACCTGAAGGGGGTTGGGGTCTGATACTCTGGTTCCTCCCCAGG
TGAAGGCCTTCGTCACCCAGGACATCCCACTCTAGTATCCTCCTTCTGTTCTAGGGGAGG
GAGGATGGGGAGAGGATCTGCCAGAATCTCCTTTCACTTAACTTCAGATACAGATGACAA
ATGGTTTTCACCTAAGTGAGATTGCATGATAGTTACTGCCCAAAGAATTCTGAGGTGGTC
TTGGGTTGGCAAGAGAAATTGACTACGTGATGACTGCCACAGACACAGGGGCAGAGAGGA
GGGCCCTTACTCCTTTGAAACTTAATTTCCTCATGTGTAAAGGGGGATCCCTGCCCTACT
TGGGCAGAAAGAAGTTGCGCTGTTCACATCAGCAAGGCCCCAGGAGCCCCCCCCACTTCA
ATTCTCCCCCCCCCACCCCCCTCCGTCCCACGACATGGCCCACCACTACCCACCTTAACA
CCATCTCCAGCCACAACCTGGTCATGAAACATCTCCCGGGGGCCGACCCAGAGCTCGTGC
TACTGGGCCACCGCTTTGAGGAACTGGAGGTGAGGCCCGGAGAGGCAGGTGGGGGAGGGG
GCTAAGAGATCGGACCCGACCCGTTGACTCCGCCCCTCCTTCGCTGCAGCGAATCCCACT
CAGCGACATGACCCGCGAAGAGATCAACGCGCTGGTGCAGGAGCTCGGCTTCTATCGCAA
GGCGGCGCCGGACGACCCTGTGCCTCCCGAGTACATGCGGGCACCCGCTAGGCCCGCCGA
AGGAGCTCCTGACCGCGCTGACCTGTAGGTCTGGCGGCGCGGCACCCCACCCTGCCTGAG
CCTTAGGGACAGAATGAAGCGCTCAGCGTCCCGGGAGCCCCTCCCTCGCTGAGAGTCGAC
GACCCGTCCCCGAG
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