SelenoDB
Release 2.0
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Transcript Report for SPT00002487_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesSus scrofa (Pig)
Transcript IDSPT00002487
Transcript release2.0
External IDNone
Gene SPG00002394_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002487_2.0 # Transcript # Selenoprotein N (SelN) # Pig (Sus scrofa) # Full length # Forward
CTCGTAGGGTCAACTCCTTCGGCCAGCTACGAGGAGGAGGAGCTGCCCCCTGACCCCAGT
GAGGAGACACTCACCATAGAAGCGCGATTCCAGCCTCTGCTCCCAGAGTCCATGACCAAG
AGCAAAGATGGGTTCCTGGGGGTAAGTTGGGGCAGGGGTGGCAGGAGGCCCCCGCATGCG
GGACCAGAGGCGGGGACCATCTGTGTGCAGTCACGTCCTGAGAATGGGTCTGTGCTCTGC
TTTCATTCTTTCTTTCCTTCCTTCCTTTATCAGCCACCCTCTGTGGCCCAGTGGGCCAGG
CTGTGGGGGTCCCGAAGTGGGTGGCATGCCCTCCTTGCTGTCCTGACACATGGTCTGGTA
GGGGAGGTAGGAGGGATAAACATGAGCCCCTGAAGGGCCTCTGGCAGTGACTGCAGGGGG
CAGAGGGCTCTGCCCCGTGTCGCAGGGGCAGGAAGGATCCGGCTGGAGGAACCAGCAAGT
GCCCAGGCTGATGTAGGCACCTCACTTATAATCATTACTTTCTGCAAGTCAGTCTTCCTC
CCCAGGCTGTGAGCTTCTTCAGGACAGGCCTGTGACTCACACTTTTGCGCATCTCCAGGC
CCCTGGCACAGTGCCTGGCACCTGACAGGTGCTCTCTTGCGTTCTCTTGAGTTCAGAGGT
CCAGCCCCTGGCAGGGGGCGTGGGGTGGGCCATCCGAACCAGCCCTACCCCAACCCGATG
CCCTGTGGTTTGGGTCTCAAGCCCTCCCAGGGTCCAGGCATCCCCAGGCCCTGCCTGCCT
TTCCGGCCTCTCCCCTGCCTTCTGCTCTCAGCTCTCCACTACTCTGGATGTCTGGCTTTC
TTCCAGCCGTGAGCCTTCTCATATGCTGGTCCCTCAGCCAGGAACAGCTTTCTCTCTGCC
CAGCCAACACCCACTAGGCCCTCATGGTTCAGTTGAACTGTCACTTCAACATAAACAAGG
GCCTGAAGGCAGGAAGTGCCAGGCAGGCCAACAAAGAGCAGAGAGAGGGTATGACTGGAC
CCAGAGCCCTGGGAACACATGCAGAGGCACCCCAGTCAGTGGGACTAGAGGACAAGTTGC
CAGAGGGCAGAGGACCTCAGCTGCCTGACTTTGGCCTTCGTTCTGCAGCAGTAAAACACC
ATAACAGATTCTGAAACAGGAGACTTCTCTCATCAGATTTAGGCTTTCCAGGATGGCAGC
TGGGGAGAAGGGGAGACCAGAAGACCAGGTCCTAGGAGGGAGGGAAGGCAGGCCGGGAGA
GGCCGTGGTGATGGAGAGGAAGGACTGCCCAGAGGATGCCTGGGAAGGAAGAAAGGCAGG
GCGTGGCTACTAATGGAAAGTTGTGGGGCGGGGCGGTGAGCAGCGGGACTCAGACTTCTG
GCTGGGGGTCAGGTGCATGGTGGCCCTAATGCCCGACGGAGTGTGGAGGGGGGAGTGGGG
CTGATAGGGAGGGTATGTTGAGGTTGAGGTCCCAGGGGGAAATCCAGGAGAAGAGTCCAG
TAAGATCTGGGTGGAGAAGGGTTTGGCATTGATGGGCTGGAGTGGTGTCTGAGCTGAGTC
CCTCCTACACCCCTGCTTACAGGGGAGTGGGGCCAGGGCGGCCCCCCCGTCCTGCCTCCC
TAGCTCAGCCCCCCTTTGCAGGTTGCTCCCCTAAGAGCTCCCCAGTCTGTAAGCAGGACC
CTGCACAGCCAGCTCTGCTTTGAGAACCTGCCTGTGAGATCCCTCTCCTCCCACCTCTGC
TTCCCACTGAGCCCGGCTCCCACCACCAGGGAGGTAGGGGACCTGCTACTGTCAAAAGTG
GTACAGCGGAGCACCCCTGAGGGGGACCAGGCACTCACTGTCACAGGGGCCCCTGATGGG
CCCAGAAGGGTGGGGAGGAGCTACTGAAGCTGGAGCTTTTATCAGGGGACCTGCGTGCTC
CAGGCAGATGTGCAGCCGGGAGTCTGCACGTCTGTCTCATTGTCTCCCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTTGGCTCTCGGAGCCTGTTTCCCTCAT
TGTGCGTCAGGGAGACGGTGACTTCCTCCAGGAGGAAGGGGAAGGGCATCAAATGTGCTT
CAGCATGGGGCTGTCATCCTCACTGCCGCGGGTGTGTAAGAGCTGTGACGCCAGGTCACA
CGCACCTGGAGAGGCCGTGAGAGCTCAGAGGAGAGCCAAGCTAGGGTAGCACACAAACCG
GGCCCTGAGGCTGGGCAGCGCCTGGCTGGCCTCCCTTCTCCCTGCCCACGCTCTCCTTCC
TCCCTCCCCACCCGGCCTGGCCGAGGGGTCCCAGGCTTTGGGGCAGAAGTGGGGGGGTGG
GGGCAAGTGCAGGGCTCTGCTCAGCAGGAGGCCTGTTTCCAGCCGGGCACCTTCCTCCAC
AGCATCCACGCCGAGTTCCAGCTCAGTGAGCCGCCCGACTTCCCCTTCTGGTTCTCACCA
GCTCAGTTCACCGGCCACATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGG
CTCTTCGTGCCCAACCACAGGTAAGAGCCTTGGCCCCGGCCCAGCCCCAGCATCCTGCTC
CTCTTTGCCCCCCACTAGCTCCAGGAGCTCAGATGCAGGGGCGAGAGGCCCCCTCAGTCT
CTCCCCAGAGCCACTTCTCCTGGAAGGGGCCTGGAGCTGACCCAGGAGGAGGCAGCTTGA
GGTGGGCTGATGGGAGGGTCACGCCATCATCCAATACGTGTGTTCCAGAGGCCACGTGGG
CCAGGCCCCCCAGCTCTGTACTGGGACCTAGTGCAGCAGCCAGCAGGCCCTCCCTGAAGC
TGCGGCCTCTCCACCCTCATACTGCTGACAGTCTGTCACCATAGCCTGCTCATGCCACCC
TAGGGAGAGGCCAGCAGGTGGTAGACAGGGACCTGGCTGGTCGGGGTCCAGGAAGGCTTC
CCAAAGAGAGAAGCATCTATGCAGTGACCTGGGGGCCGAGGAGAGTTTAGCCAGGCAAAG
GGAACCCCACCCAAAGGCCTGAGGGGCCGGCCCTCCACGCCTGCAGTTGCTACCACAGGC
CCTGGGGAGCAGAAGGGAACTCCTGGGAGGGCTCCATGCCAATCACTGGCCTGCCTGCCC
AATGTGCTCAGAATCAGCCTCTTGTCAGGAGCAGAGGATGCAGAGAATCCAGGTTCCTCT
CTGATAGCAAGTAGCTGCGTAGGGGGCCTGAGTGACTGTACAGGGACAAGCCCTGGGCTG
GGAGCCCAGGGGCTCAGAGCTAAGTCTCGGCCGTGGCACCAGTGGGCTCCGTGGCAGTGG
GCGAGACCCTGGCCCCTCCAGGCCTGTTTCCTCATCTTCTGGATGGGGGGGTGGCTCCCA
GGCAGGAGCGAGGGGGTTGTTGGGTAGCCTGGGAAGAGGAAGTTGCCCCTAGGAGCAGGA
GTAGCTTCCTCTCTGTCCCCCCAAGCGCGAGCATCCCAGTTCACAGGGGAAAGCTCTCCT
CCTCCTCCTGCCCTCAGCACACAAGCCTCATGCTGCAAGGGTTCAGCCCAGGGATTGGAG
GTGGGGTCCTGGACTAGGAGAAACAGGAGCAAATGCTCCTGGGCGCGTGTCATGACTAAG
CCGCAGGCGCCTGACCCCCTCCCAGGGCACTGAGCTCACCACGCTGGTTTCACTGGCCCA
AGTCCATTGGTTGTCAGTCTTGGGGCGACCCCATGTGGCGGATGCGCAGGTTGCACATGA
TCAAGCCACCTGGGGAGGCCAGCTCAGGAAGGACACTGGTGGCTTTTCATTCCTGCCCCA
CCCTGTGTCCTGGGTGATCTCTGCCTCGAAGAGTCACGAGTCACGGGTAGTGCGTGAGAC
ACAGATGGGGAAGCCCTTTGTGAAGGGCCGGGCCAGCGGAGGGTGCTGTGCTCACAGTGC
CTTCCGAGGAGGCAGCTTGGGCAGAGGAAAGGGCCCAAGTTCTGCCATCAGAGTCTCAGT
GACTGAGACCTTGGGTTCACCTTGCCAAGCCTCAGTGTCCTCTTCTGTAAAATGGGGTCA
GGTGCATACTTTCAGTGAGATAAAGTCCGGCGTATGGTTCGTGGGTCTTGATGGGGGTGA
TCTGCCCTAGCCACCCTCGCACCTGTCCCCAGGTCTCTGAATGTGGACATGGAGTGGCTA
TACGGGGCCAGTGAGAGCAGCAACATGGAGGTGGACATCGGCTACATACCCCAGGTGAGC
GCACGGGTGGTCCTTAGCCTGGTAGGAAGGCAGAGCTCGGCTTCGGGGGGGCCCAGCTGG
CTAGGAGCCTCAGAGCAGTGAAGGGCAGAGCTCCTGGCAGACCAAAGCCACTGTCCCCAA
AGCAGGATCCTAGAAAGCCACCTGTTCCTGCACACAGAGCCCACCCTCTGCCACAGGCCT
TCAGGTGGTGGAGCCCTGGCTGGACGCTGGCTCTGTCACGACTCACTGCACAGCCCTGAC
CAGGCCCTGCCCTGGGTCTGTCTCCCCACCTCTGCAGTGAGTGGGGTATCTTTGAGGGCC
TCTCAGGTTCCCCAGAGGACCCTTGGCCCTCGCTGAGATGGCCTCACTGATGTCATCCCT
TACTGACCTCCGGCCCAGATGGAGCTGGAGGCCATGGGCCCCTCAGTGCCCTCTGTGATC
CTGGACGAGGACGGCAACATGATCGACAGCCGCCTGCCCTCGGGGGAGCCCCTCCAGTTT
GTGTTTGAGGAGATCAAGTGGCAGCAGGAGCTGAGCTGGGAGGAGGCCACCCGGCGCCTG
GAGGTGGCCATGTACCCCTTCAAGAAGGTGAGGCGGGTCAGGCTCCCCGGGCCGGAGCCG
GAGCTGGGGGAGCAGCAGGTGGGCCCTGGGCGTGGGGTCTGGGCAGGGCTGCTGCTGAGC
CTGCCTCCCTGTGGGCCCAGCCTGGGTTGGGGAGCCTCCCATTTGCCCTTCAGAACTTGG
AGGAGGCATCCCCTGGGCTCAGCATCACCCCTTCACCCCGACACACACACCACACACACA
GCAAACGTACAGACATACATACACACACATGCAGTCACACTACCCGCACACACATACGTA
CACACACTGCCAACACACCCACGTACACATCACACACTCAGCCCCTGACTGGGATACCAG
CCGCACACAATAGCTTCTCTCCGTCTCGACTTGGCCCCAGGTCACCTACCTGCCGTTTAC
CGAGGCCTTTGAGCAAGCCCAGGCCAAGAACAAGCTGGTGCACTCAATCCTGCTGTGGGG
GGCCCTGGACGACCAGTCCTGCTGAGGTGAGGGACACCCCGCCAGTCTGAGGGGAGAATG
GGGGGGTGGGTTTCACACCTCGTGGGTGCAGGAGGTTCTAAGAGCAGTGGAACTCTCCTA
CCTGAGCACAAGGGACTCAGGGCGACATGGGGCAGGGGTGTGGGGTGAGGGCTTCGGGGG
TTCTGTGCTAAGCTCGGAGGAGGCTGCTGGACACAGTAGAAGAGCCCAGATTGGCCATTT
TCAGCTTAGAGACCTTGGCCAAGTGACTTTCCTTCCCTGAGCCTGTTTTCTCAGCAGTGA
GGGGGTAACATTCACCCAGAGTATGTGAAAAGAGGCATGAAAGTGCCTGTGCTCTGTAAA
GTGTTGCACACGTGTGAGAGAAGGTAGTGCCAGAGGCTGGGCTGCATTCGCTCATTCACA
AAATTCAGTGGAGACCTGCTGGGTGCAAAGTTCTTTGGGTGCCTGACAGTGGGTTCAAAG
ATGAGCAAACAGCAGCCGTACCCTCATCCAGCCAATCAGCAAACATCCTGGGCCCCTCCT
GTGCCAAGCCGTAGGCTAGGTGCTGGGTATCTTGCATTAAGGAAGTCAGAAGCAGTCCCT
GTCCTCAGGGAGCACACAGTGTGTGCAGAAGGCAGACACTGAATGAATAAGTACAAGCGT
GGTGAGTTTACACAAGGCAAGGTGCAAGTGTGTAACAGGAGGGCAGGGAAGGCTTCTTAG
AGAAAGTGACATTTAAGCTGAGACTTTGAAGGATGAGGAGGAGTTTGCCAAGTAACAGGG
AGGAAGTGTTTTAGGTAAGAGAATAATCTGTGCAAAGGCCCTGGGGCCCAGAGTTTAATG
AGTTTAAGAAACTGTCACTGTGCAAGCCGCTGGGCCAGGTAGGCCCCCACCCCAGGCCTC
GGCCTAGGATGCTAGTATGTTGTTGATGTTAATTATGGCTCCCATTTATTCAGCACCTCC
TCTGTAGTGCACGCTTTGAGTCTGCCATTTCACCTGGCGACATAGACCATTCTACAGTCC
ACAAGGTTTATGGCTGAGAGAAAACCCAGTATGACATGTGGGGTGCCTCAGCCACCCAGC
CTTGCCTCTCCCCAAACAGGTTCAGGGCGGACTCTCCGGGAGACTGTCCTGGAAAGTTCG
CCCATCCTCACCCTTCTCAACGAGAGCTTCATCAGCACCTGGTCCCTGGTGAAAGAGCTG
GAGGACCTGCAGGTGAGTGGCAGGTGGGTGGGAAGAGCCCCACGGGAGCCCCTGGGACAG
CGCTGGGAGCGGAGGCATCAGGAATGTGCCCAACTGTCCCTGTAGAACAACCAGGAGAAC
CCATCCCACAAGAAGCTGGCTGGCCTGCACCTGGAGAAGTACAGCTTCCCCGTGGAGATG
ATGATCTGCCTGCCCAATGGCACCGTGGTA
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