SelenoDB
Release 2.0
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Transcript Report for SPT00002606_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesTakifugu rubripes (Fugu)
Transcript IDSPT00002606
Transcript release2.0
External IDNone
Gene SPG00002513_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002606_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Fugu (Takifugu rubripes) # Full length # Reverse
TCAGGACATGGAGGGGATGGGAGCGTCTACAGTGTCCAGAGGTTCCCAGTGACTGTTCAT
CAGGGCATCATAGAATTCCTCACTGCGTTCCATATAATCTTTGTTCCACTGCTCCACGTC
ACACTCAGGGATGGATTCTGTAAAACACATCAATAACTGGTTCAATACCTTCACAGGTTG
TAAAAGATTGGTAAAAAGGTAGAAGGAGCCTAATGTATCAATCATTAAATACTGTATATT
TTTATATATTTGTGTTCTTGAATGATTAACCTGACAACTAACTTAATTCCATCATTTGAC
ATCTAAACATCTGCACACATCTGGACTTATTACAGTTCTCACTTAAAAGCTGTCAATTGT
TATTTCTACATATAATTATATTGTTTACACCTTTTATTCCCAACCTAAAGATATTCAGTT
CACTGTAAAGAACAAATCTGCTTATACCGTCAGCGGTTTCCTCTTCTACGGCCCCAGTTT
CTTCATGGTTCTGCTGGGAATGACATCAAATAGTAACTGTTTTCGGGAAGAACCTGCAGA
AATGTTAAACTCTGCAGGAGTCCTGGTTCTCACCTCAACAGCTCCAGACATGTCAGTGGA
CGTAGGTGGCATCCCAATGGGAGGGGGAGGCATGTGTCCGGGTGGGGGGTATCCGTACCC
ATAATTATAGTTGTAGCCACTGTTATAGCCAGTGTTGTAGCCGGTATTGTAAGTGTTGTT
GTAGGATGAGTTGTAGCCACTATATTGATCATAACCTCCCCACTGAGAGTAGTAGCCCCC
CTGAGCCACACTGTTATTACTGCCATAGTAGTTGGACTGGGACTGGTTATAGCTGCTGTA
GTTCTGGCCCTGCCCCCCCTGGTAGCTGCTGATCTTCTGGCTGAAACACAACAAAGATAT
TCACATTCTTTCAACACTTCCTGTGAATTAAGCCAAAGAATGACAGTGGCAGCTTCTTAT
GAAAGCTATTATTTATCCAACACAGACACATGACAGACGGGAAGTGTTTGCTGCGTCCTA
ATGAAGGCAAGTAACCAATCACCTGGCACAAAGACGCTCAGCTGCATCTTACCTCTTGGC
TACAGCGACACTGAGTCTGAGGGGCTTTCCGCTCAACATGGTCCCCTGGCACTCCTCGAT
GGCCTTCTTCTGCTCGCTCTCCTCTCCAAACTTGACAAAGCCGTAGCCTCTGCAAGTCAA
ACGGCAGTTACAACCCCTCTCTACACCACTCAGCGCTCCATACTTGGCATTTAACATCCA
CTTAAAGAGGAAATATAATGGGTATTATTATGGTAGAACTGAAACTTGTTGTTTTACTTT
TAACATGAGGTAGCATCACTTGAATTGTGAGTTGCTCTTGCTTAGCCTATATGGGGAAAA
CAATAGTTTTAGCATAAAATGGTAAGAAAACATTTGTTCAGCTTCTAGCGACAATACAAG
ATATACTGCTGCTGGCCAACGTCCACAGCAGTTCTATCTAAAGAAAAGAATTACAGCAAA
GAAAGCATGACATATATGTAGATTACAGCACATTGCTTAAAATTCATATGCCAACCAGAA
TGTACTTGAAAACAGTAGTACTGAGCACAGAGAATATGTCAGCCTGGTCGAACTGTGTGC
CGCTACCATACCTGGAATATCCATACTGGTCAGTGACCACTTTGGCTCCCTTGCAGGAAG
GGTAATTCTTGAAAACTTGCTGCAGCTGGAAGTCCTGCACATCAGAGGCCAAGTCACCAA
CAAACACGGAGAACTCGGGCCTGTAAAAAAACATGACTTTAATCAAGTTACAAGTAAACC
GAAATCAATTCAAAGGACAACACCTTTCAGAAAAATAGTTTAAATTACATTAAAGTCAAT
TTTCTTTCTACATGGATGTTTACCAGACTGCTTCTTTCTATTAAAGAGCCTGAAAGATGA
GTAAAAGGCAGGAACAGAAACAAGCTTACCCTGCTTCTGGCCGTTTACCATAGGTGGCAT
AGTTGAGCTTAAACTTTCTTGGCTGTGCAGGGAGAAAGAAACAAATCTCAGTAAGTCAAC
CACAAACACTCAAGCTGTGTAGTATAGCACTAATATTGCTGCAAATGAAGAGTGGCGTTA
TTATGGTCATTATTGAGTTTACATACCTCCTCCAACCAGAACAGCCTTTAGCCCATTCCT
CAGTTAGTTCCTACCAGACTCTATTCACCAGCTTCAAACAAAGTGCATACACGTACAAGA
AGCCTGTCAGCCACAATAGCAGCAGCAGGTACAGGCTGGTGCACAGGGGGGCCCGACAGC
TTGGCCAGATCACAGGAATAACACTGTTTCAAATTCAGTAGCAAGCAGCAAAAGCTCACA
AATATGATGTCATAATTTTAAACAATCTGGTAACTGAGATCTATTTACACCAGCAGCTTT
TCAATATCTCTGCTTATTCCTTTTATATTACAAACCATGAGAAAAGATATCATCTTTAGT
ACAGCACTAAAGCAATTTCCTAACAGCTTACTTATTCTCATTAACATTTTAACAATTCAT
TTTAACAGGACATTTGAAATTTCATCATACAATGAACAATCAAACATGGATATACAATAT
AAATAGTAATTTTCAAATTTAATATTTAAAAATATTTTAATGTCAGATGCACACACATTG
TATGCAACGTCAGATGAGCACACTTTAATCAGAGTAGTGTTGAAATGAGTGTTTTTTGGA
ACGTATTTAAAAGTTACATTTAGGTTGTATGATCAGTATAAAAGCAGAAAAAGCAGATTT
ATGTACCGGTCTGTTAAGTATCTTCATTTTATATTATTTTCGCATAGTATGGACTAGTTC
ACATCTGCACCACATCTAAGGCAAATTTAAATTTGACTGAGGTGTAACGTTAAACTAGCC
AGTTAAGTTGACGGATTTTTGGGAGTCAGAATTCCGCACAGCTAATCGGCTTCAATGTTC
CAACAAACAAGAACAAAGCAGCAAAATAACAAAAATGAAATTCTCTTTACAGTTTTATTG
TCATTAAGATCATGCAAGACTGGTGATCCTACCATATGCACTATCAAATTAATCATTTAC
ATTTTATAGGTCAACATTAAAATGTAAATAGATAGCAACCACAATGTTGGAAGATTATGT
TAAAGATATGGGGGAATGGGTTGAAGTTACATTATAGAACTAACCGGGTTTGATCCAGGG
ACTAGTTTTCCGTTGAGTCTTTGGACACAGCGTTCAACACTTGCTTCATCAGCCAGCTCC
ACAAAACAGTATCCTGCTGAACCACTGCACAAAGAGACAATCAACACATTAGTGGTTGGA
AAAAAACAGCTACATTTGCCTTCATACCCACCTCTGTAAGAGTGTTGGACACTTTGTGTA
AGCACATATTAGAATGAATGTGTCTATTTGGCGACGGTGCCAAAACTGTCTACTTAGAAC
TAAGTTGTGTTTGAAGGGTTAGCACCTACCCAGTGATCTTGTGGGTGATGATTTTGACTC
CAGTTGGTGATTCTCCCATGGCACTAAAGGCCTGCTTGATGAAATCTTCTTCCATGTATG
GGTCCAA
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