SelenoDB
Release 2.0
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Transcript Report for SPT00002607_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesTakifugu rubripes (Fugu)
Transcript IDSPT00002607
Transcript release2.0
External IDNone
Gene SPG00002514_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002607_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Fugu (Takifugu rubripes) # Full length # Forward
ATGAGCACGCTGTGGATGGGGAACGTAAGTTGTTTGCTGTTTTAATGTAGCGTGTCGGCA
ATGTCGCATTTAGTTAAATACATTGTTGTGGCCAACGTCGGTATGCGTTCGTCAACTTGT
ACAATAAGCCAAACTAAATATCTAAACTCGTGTGTGTGTCTGTATACATATATAAGTATA
TATTTCCCAGTTAATTGAAAAACACGATCTCATAGCTGGCGACCGCTTGTTTTAAAGGGC
ATCATGCGAGATGTAGTTAGCTTTAGCTTGTTGGGCTGTGTTAGCATCTCCCCAGTATCC
ACATTTGAAGAGGAAATCTTCAGTTTCTAAAGCTGAAACTTTGTAAGCAGCGTTCTTTTG
TGGATCCTTCAACCTTGAGTTCGTTGATTATATACATTTTCTACGCTCTTTTGTTCGCCT
TCGAACAAAGACAGGCTTCCTCACATTGGTAAACCGCTGATGGTATCGGGCTGCCTGAGG
TTGGGGACAAAACGCTTTAAAACTATAATAAACCTTTATAATGACACCTTTCCATCGAGC
AATTCTAGTCCATATACATTATTTGCAATTCCTGCTCTTCCTTAAAGCATATGCATGTAG
TTTGACTTTTGAAGTGCTTGAAAGTTTGTTTAAATGACCTCCAACACGACTGTTTTATTT
TTATTTCATTTATTACATGGTCAATAATGCATAGGAATGAAATAGTTACATTTGAACATG
ACTGAAAAATGCATTGAGCTTCTGATGGTGTTGACAAGTTTACCTGTTTTCTCTAAACCT
CCTGGATGCCTCCATTCACCCCAGGAGCCATTTTGTTAATCACCCATCGATTGACCTTCA
TTTAGCTCTGCTTTTTGCAGTGTTCCACATAAATTGAATGTGTGTAAGATTCATTGTGAT
GTTTACACACTATGAATGTTAGATGCAAGATTTACTTGGTCTGCAATGATCCAAAAAATG
AAGAAAAAAAACCTTATAGTTTGGCTAGAGTGGCGGCGTGATGCTGCTGAAGGTGTTCCT
AGAGATTCACCTGGTGGATTTATGAAGCTCTGGGGTGGGGGCCAACTTCACCCTTCTCTA
ATGTCTGGTCATCATTGCAACACAGCTGGAGACCTACATGGACGAGAAGTTCATCACCCG
AGCCTTCTCCACCATGGGCGAGCAGGTGGTCAGCGTGCGGATCATACGCAACAAGATGAC
GGGGTAAGGCCGCCTTCTGCTGCCTTTGGCGTCGTAGGTTCTTCTGACATTAAATAGTGT
GCTGCCACCCAGGGGTGCTCTGGGCTACTGCTTCGTGGAGATGACCGATGAAGCCACCGC
CGAGAGGTGCCTCCGCAAGATCAACGGGAAGTCGCTGCCAGGCGCCAGCCCGGTACGTTT
GTGCTCCTCTGCTCAGTTGAATTGGCTCCTTCAGAGGTTTACATCTGTTGCTCTGTCCAG
CCCACAAGGTTCAAGCTAAACCGGGCCACCTTTGGGAAGCAGGACGTCGGGTGAGTCCAG
ATGCCGACGGGAGAGAGAGGACGGAAAGAGCCGGCCTGTTTCCTCACTCGTCTCCTCTCC
CGTTTCAGACAAATGTACTCTCTGTTTGTGGGAGACCTGACGCCAGAAGTGGATGATGGG
ATGCTTTACGAGTTCTTTTACAACCGCTACCCCTCGTGCCGCGGGGGGAAGGTGGTGTTG
GACAGCATGGGCAACTCCAAGTGAGTATCGGTAGCAACCTGAAGCCAGGGGGAAACATTT
GTTCCCCAACACAACCCGCCTGGATCGGCCTCCCCAGTAGAACCAGTAGGAGCCACTTGT
CCTCCATGAATGACTAACGAGGGATGTGGGTGCAGGGGCTGTGGTTTTGTTCAGTTCCCA
GATGAGCGGCTGCAGAAGAGGGCGCTGGACGAGTGCCAGGGCGCCGTGGGACTGGGCAGC
AAAGCCCTGCGGCTCAGCCTGGCCGCCAACAAGTGAGTCGCCGCCACCATTTTTGTGCGT
CTGAAGCCGAACGCTGGCAGCGCCACGTGTCTCCTCCCTCCTCCAGTTTAAGGAACCGGC
AGCCGCAGCAGTCGGAGACCAGGGCCGCGCAGCCCAGCTCGGGCTACAGGGGCGACTACG
ACCAGTACAGCCAGTACCACCAGCAGCAGATGTACCCTGGCTACTACTCCTCGTGGGGCT
ACGACCAGACCGGCTACGCCTACAACAACCAGCTGTACGATTACAGCCAGTACCCAGCGG
CGCAGGTGAGTCGCGCTGGACTCTGAACCAGCTGCTCCCCGTTCTTACACTGGCCGTCTG
ACACCGTCTTCTTTCCAGGAGAGCGAGCCCCTTCCTGACGACGGACTCGAAGGTTTGTAC
CGGATCCCGGCTTCTGATCTTCCTCTCTCCGGAACATTCCCCCCCCACTGCTGTGAACGC
TCATGGTGTTGTGGCGTTGCAGAGCCCATGGTGGAGCTGAACGTGGTGGAGGCCAACCAG
AAGTTCATGGAGCACAGCGAGGAGCTGTACGACGCTCTGATGGAGAGTCGCTGGCAGACG
GCAGAGTTCTCTGCAGAGCAGGACTATGTGACCTCCAGCCTGCCTGAGCCCATTTACTGC
TGA
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