SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002607_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesTakifugu rubripes (Fugu)
Transcript IDSPT00002607
Transcript release2.0
External IDNone
Gene SPG00002514_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002607_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Fugu (Takifugu rubripes) # Full length # Reverse
TCAGCAGTAAATGGGCTCAGGCAGGCTGGAGGTCACATAGTCCTGCTCTGCAGAGAACTC
TGCCGTCTGCCAGCGACTCTCCATCAGAGCGTCGTACAGCTCCTCGCTGTGCTCCATGAA
CTTCTGGTTGGCCTCCACCACGTTCAGCTCCACCATGGGCTCTGCAACGCCACAACACCA
TGAGCGTTCACAGCAGTGGGGGGGGAATGTTCCGGAGAGAGGAAGATCAGAAGCCGGGAT
CCGGTACAAACCTTCGAGTCCGTCGTCAGGAAGGGGCTCGCTCTCCTGGAAAGAAGACGG
TGTCAGACGGCCAGTGTAAGAACGGGGAGCAGCTGGTTCAGAGTCCAGCGCGACTCACCT
GCGCCGCTGGGTACTGGCTGTAATCGTACAGCTGGTTGTTGTAGGCGTAGCCGGTCTGGT
CGTAGCCCCACGAGGAGTAGTAGCCAGGGTACATCTGCTGCTGGTGGTACTGGCTGTACT
GGTCGTAGTCGCCCCTGTAGCCCGAGCTGGGCTGCGCGGCCCTGGTCTCCGACTGCTGCG
GCTGCCGGTTCCTTAAACTGGAGGAGGGAGGAGACACGTGGCGCTGCCAGCGTTCGGCTT
CAGACGCACAAAAATGGTGGCGGCGACTCACTTGTTGGCGGCCAGGCTGAGCCGCAGGGC
TTTGCTGCCCAGTCCCACGGCGCCCTGGCACTCGTCCAGCGCCCTCTTCTGCAGCCGCTC
ATCTGGGAACTGAACAAAACCACAGCCCCTGCACCCACATCCCTCGTTAGTCATTCATGG
AGGACAAGTGGCTCCTACTGGTTCTACTGGGGAGGCCGATCCAGGCGGGTTGTGTTGGGG
AACAAATGTTTCCCCCTGGCTTCAGGTTGCTACCGATACTCACTTGGAGTTGCCCATGCT
GTCCAACACCACCTTCCCCCCGCGGCACGAGGGGTAGCGGTTGTAAAAGAACTCGTAAAG
CATCCCATCATCCACTTCTGGCGTCAGGTCTCCCACAAACAGAGAGTACATTTGTCTGAA
ACGGGAGAGGAGACGAGTGAGGAAACAGGCCGGCTCTTTCCGTCCTCTCTCTCCCGTCGG
CATCTGGACTCACCCGACGTCCTGCTTCCCAAAGGTGGCCCGGTTTAGCTTGAACCTTGT
GGGCTGGACAGAGCAACAGATGTAAACCTCTGAAGGAGCCAATTCAACTGAGCAGAGGAG
CACAAACGTACCGGGCTGGCGCCTGGCAGCGACTTCCCGTTGATCTTGCGGAGGCACCTC
TCGGCGGTGGCTTCATCGGTCATCTCCACGAAGCAGTAGCCCAGAGCACCCCTGGGTGGC
AGCACACTATTTAATGTCAGAAGAACCTACGACGCCAAAGGCAGCAGAAGGCGGCCTTAC
CCCGTCATCTTGTTGCGTATGATCCGCACGCTGACCACCTGCTCGCCCATGGTGGAGAAG
GCTCGGGTGATGAACTTCTCGTCCATGTAGGTCTCCAGCTGTGTTGCAATGATGACCAGA
CATTAGAGAAGGGTGAAGTTGGCCCCCACCCCAGAGCTTCATAAATCCACCAGGTGAATC
TCTAGGAACACCTTCAGCAGCATCACGCCGCCACTCTAGCCAAACTATAAGGTTTTTTTT
CTTCATTTTTTGGATCATTGCAGACCAAGTAAATCTTGCATCTAACATTCATAGTGTGTA
AACATCACAATGAATCTTACACACATTCAATTTATGTGGAACACTGCAAAAAGCAGAGCT
AAATGAAGGTCAATCGATGGGTGATTAACAAAATGGCTCCTGGGGTGAATGGAGGCATCC
AGGAGGTTTAGAGAAAACAGGTAAACTTGTCAACACCATCAGAAGCTCAATGCATTTTTC
AGTCATGTTCAAATGTAACTATTTCATTCCTATGCATTATTGACCATGTAATAAATGAAA
TAAAAATAAAACAGTCGTGTTGGAGGTCATTTAAACAAACTTTCAAGCACTTCAAAAGTC
AAACTACATGCATATGCTTTAAGGAAGAGCAGGAATTGCAAATAATGTATATGGACTAGA
ATTGCTCGATGGAAAGGTGTCATTATAAAGGTTTATTATAGTTTTAAAGCGTTTTGTCCC
CAACCTCAGGCAGCCCGATACCATCAGCGGTTTACCAATGTGAGGAAGCCTGTCTTTGTT
CGAAGGCGAACAAAAGAGCGTAGAAAATGTATATAATCAACGAACTCAAGGTTGAAGGAT
CCACAAAAGAACGCTGCTTACAAAGTTTCAGCTTTAGAAACTGAAGATTTCCTCTTCAAA
TGTGGATACTGGGGAGATGCTAACACAGCCCAACAAGCTAAAGCTAACTACATCTCGCAT
GATGCCCTTTAAAACAAGCGGTCGCCAGCTATGAGATCGTGTTTTTCAATTAACTGGGAA
ATATATACTTATATATGTATACAGACACACACACGAGTTTAGATATTTAGTTTGGCTTAT
TGTACAAGTTGACGAACGCATACCGACGTTGGCCACAACAATGTATTTAACTAAATGCGA
CATTGCCGACACGCTACATTAAAACAGCAAACAACTTACGTTCCCCATCCACAGCGTGCT
CAT
Chart Advanced