SelenoDB
Release 2.0
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Transcript Report for SPT00002658_2.0
Identity
TranscriptMethionine sulfoxide reductase A (MsrA)
SpeciesTetraodon nigroviridis (Tetraodon)
Transcript IDSPT00002658
Transcript release2.0
External IDNone
Gene SPG00002565_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002658_2.0 # Transcript # Methionine sulfoxide reductase A (MsrA) # Tetraodon (Tetraodon nigroviridis) # Full length # Forward
ATGCTAACTTCCTCCAGGCTGCGGCTCAGTTTTCGTCATTTTGTCAACGGTCGAATGGGA
GACATGTCCTGCAAAGCCAAGCTGCCCACCCCAGAGACGGCGCTTCCCGGCCGGTCCGAC
AGCATCGAGGTGGCCGGTAAGAGAAGCGCTGCTAGCGGCCGGACGCTAACGTTAGCCTAG
CAGAGCCGGGGACTTTCAACGCACGTAGGGAAACAGAGGCGAGTCGTACCAAGAATTGAC
AGGTGTGGTTGGTGTTTTGGTTATTCAAGAATCGTTGTAACGCAATCTTCCAAACATTAA
TATCATAAATACGGCTACAAATTCAGTTTTGGATGACGTTTTAGATAACGTCTTCCGGAA
ATTGCCGAGAATAGCCGAGTGCAGTCGGAAAACATGGCGAATATAAAATACGTCTTCCGT
TTTTTCTCCGGGTTGTTTAAACCTCTCAGACAAACGTGTTGCTGAACAAGTGCCGGTGTT
TAGGACCCTAATCAGGGTGACCTCCGGGTCCCTTTCTGCTGCGTATAACAACGTGCCTTT
TCAAAGACTTGGAGAAAAGTTACCAGACGCGATTTTTAGTCCTGCTTTCTCATTCACACG
TCTGCATTTTACTTTCCTTTTTAAACATAACCGAACAAATATAAAAGGAATTCTGACAAG
TTAAACTCAGGAGAGCAGTATCTGAAGTATGAGCACTCTCTGTAATTCCCTGAAGCTAAA
GAATGATCGTGGCCCTCTGAAGGTGAGAGCGGACGCACCTGTGGTGAGGTTCTGCTGGAA
CCAGCAGGCAGAGCAGCAGGGCTTGGCAGCCAGGACGCCCGGCACCAATCTGCCCCTCTT
GACTCTGAATGAGGGGGCAGAAAGCTGGCACGCCATGAACAGATCTGCACTGGCAGAAAA
CACACACACACACACACACACACACACACACACACACACAGACACACACAGACAGTCACT
CCTTGTCCCCCAACATTAGCCAGGAGAAGGTGGGAAGAATGGATGCCGGAGTAAATGTCC
CAGTGTGTCCAGTGTTTACAGGGTGGGCTGGGGTGGGGGGTCCACAGTACGAATGGAGAG
GATCGGAGGTGTTTGTAGAGCGTCAGACACCCTGGAGCGTCGCCAGGGATCCCAGGAATG
CTGGTGAAAGCGGAGCGAGGGAGCAGGGAGGACGAGCCTGCGGTTCTGAGGGCTGGCAGC
CCTTCCTTCCTTTGTCTGCCTGGACCAGGGCGGCGGCGCCACGTCAGGACAGGTTCTGCT
CTGAGGGTGAGGAAAGGAAGTTCTGAGCCAGAGGAACTCGATCTGCGCGGACAGAAAGCA
GAAGCAGGTCAGAGCTTTGTAGGGACGTCCTGTCCCAGGAGCCGGACCCCAGCGGCTGGA
TCAGAGACCGACCCGGCGTCCAGGAAACTCAACAGGTCGGCGACGGTAGATTCTTTAAGC
GGCTCCGGGGTGCCGGCGGAGGCTGAGCCGTCCTGGAGGTCTGTGAGTGTGTCAGGAGTT
GTTGAGCAAATCTGAGCGTCTTTGTGCTGCCTAAGCCGAGAGTCACAGAGCAGGAAGATG
GAGCTTCTATTGGTGATTACAAGCAGTTTGTAGCCGGTTTGGTCACAGGCTGCAGAGCCC
CTGGCCGCTGTGGCGTCAGAGGGTTGGGGAAGACGAGCATTAGATCCCATCCTGCTAACA
GCCGGTCCGGGTAGCGCCGGTTTGCTCCCCGTCTGGACCCGTCTGCCCAGAGATGGAGGA
ACTAATGTTGTGACATCTCACTCGGAGTCCAGACGTCGGACTGAAGATAACCTCCCCCGT
GGGGTCACGACCTCACAGCCATCCCCGTGTCTCACTCAGATGAGGCGAACGCGTGGTGTT
TTTAACCCTTTAAGCTCCGCTCTCTGGCCTGGTCTGTGGGATTGGGCAGATCTGCAGTCT
TGTCAGTAACTTGGTGGACTTGCGTCTGATTCTGAGCTCCGCCCTGAGTGTCGGGTACCT
GAGCTCTGGGGTCGGGTCTCCTGCTGATCTTCATGCTGGTTTCTGGTCAAAGCTCTGTCC
TGCTCACGTGCACCTGCTCGACACCCTCGCCTCCCGTCGGATGCTTCAAATGAATTTGGC
GTCGCCGCAGAACACGAACGTTCACGCTGGTGCCTGTAATGATGGGCCGGAATAATAAAA
AACACAAGAGTGGCAATCACCCATGCTGATTGAGGGGCTCAGATGGTGGGAGACGGGAGG
AAAGGCAGAGATGGCGGAGGAGCAGGAGGAGGAGGAGGAGGAAGGGAGCAGGCAATCAGA
GGCAGAGATGCTGAAGGAGGAGGGTGGGGGGCTTACTCTGTAGATGTAATTGCAGTTGAA
GCAATTTCTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACTGTTCAATATCC
CCCATCCACACATTAGCTGCACCCTTTCATTTATCACTGTCAGCTCCGGGGGGGGATGGG
GGGGGTCCGGCGCAGAGACATCTAGCAGATTCTGGAAGCAGAGGAGCAGGACTGAGTCCG
AACCCGCACCCCCGAGACGGGTCCACCTGGATCCTCCCGCCGGCTCCGCTGGGGCGCCGT
GTTTCAGGTGAAATATGAAAATCAAGGCGGGGCCAGGAGACGGAGGCGGCCTGACGTCAC
GTTCATGTGGGCCTGAACTGAACTAGAGCGGCACTAATGGGTGTGTGTGTGTGTGCGTGT
GTGTGTGCCACAGATGTCTCTCTGGAAGAAGGCCGCTTCTGTGATCGAGTGTATTATTCT
GACAGGATTTAGGGACTGGGAGGGTGGCTGGTTTCAAACACACACACACATCGTTGTACT
TCTATCTTTGTAAGGACTTTCACAGGCGTACTGGCTGAGCCAGATCTTTACCCTGACCAT
CACAGCTGACCTCTGACCCTGACCTAACCTAACCCAGTTCTAACCCAACCTTTAAACCCA
GTCTGGACCGTCAAACAGGCCTTGGGAGTGGCCAAAATGTCCTCACTTTGCTAGTAGACA
ATTTAGGTACTCAGTATGTAGCTTAGGCACACACACACGCACGCATGCACACACACACAC
ACACACACACACACAGATGTTTGATGTGAAGTGTCCTGAAGTGTTTTTTAACCTCTTTTG
CTACAGTTACTGCCAAATAAAAGGGAATTAATTATCCAACAGACAGAAGGACAGACAGGT
AGCGTTCTTTCTGACCTGCTCCAACAGAAGGTGTGTGTGTGTGCGTGCGTGTGCGTGTGC
GCGTGCGTGCGCTGCTCCTGATTTTGTAGCTAAAACACTCTGAACCCAGCTCCTGCTACA
TTTGAGAGCAGGAGCTGCATTAATCAACAGAAGGCGTTTTCATGGTTGTGGGGCGATAAG
AGCTCCGCTCCTCCGTCTCATCGAGCAGAGTCGGAGTGTGTTTGTGCGAACGCAGATAAC
TGCACGATATTAACCCGAGCGTCTGGAAACGGGCTCAAACATAAAATCCGCCCGTGGTCG
CACTGAAAGTCTGACTGCTGGTGCAGACCTGGATCCTCGTCTGGTGGTAGTGGTGATGTG
AGCACGTCGGGTGGTGTCACGCTGCCGTGGCAACGTGCACGAGGGCTAAAGCTAAATAGC
CAGCTAACGCAGACACCTGCACAGGTAGAGGACCAGGACAGTCACATGATCACAATCCTC
CAGGAGGAATTAGGGTTTCTAATAATCTTTAGATTCAGTTTGGTCAAATTCAGATACACT
GTGGACATGCGGTTGTTGGTGAACGGCGTGTGTGTGTGTGTGTGTGTGTGTGATGTGATG
ATGATGTGTGTGTATGTGTGTATGAAGCGGGGGTGGGGGAGGATCTGCCGAGGGAGCTGG
GGGATTCCAGCTGTGGGGTTCATTCTCATTCCACCTCGTCTCATTTATTTGAAGCCATTT
CCCTCCCCCACAGCATCCTTGTACATCCAGCCATGTGTAGACACACACACTACACACACA
CACACACACACACACACGTACCTCTGTGCTGGGCTTCAGGTGGATCGGTGGGGCGCTCAT
GTGACGCTGAGCAGACATGTGGGAGCGGCGGGTCTCTTGGGCAGGCGGCTTGGCTTAGCG
GCCGGCTATGATCGCAGCTGCGCGCGCTTGCTGCGCACATACAAACAGCACTGCAAGTGC
AACAAAGCGCTGGCGGCTTTGGCTCAAGAAGCACACATGCGCATGTGCCGTGCTTTTTGG
GTGGGGGCGCGCGGCGGCTCGCTATAGCTGTCTATATATTAAAAACAAGCTGCGCACGCA
CGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTCCTCTGTCGCTCACTCCGGTCGTACGTTTAAAAGT
CTACACGTGTGCAAACTAGCGTTCACGCTCGCGCTGCTCACTTCTCCTGCCGAGACTTCT
GCTCCACCAACCCAACAGAGCCGTTGCCATAGAAACTGAGGACGACGTTCCTCTTTCGTT
CTCTACTTTCCAGTTTTTTTCTTTTCCTTCATCCAAACACAGTATTTGTTCCTGTTAGAG
GAAATTTGAAATCTGTTTATTTTACATCCGTAGTTTCTTCGGCCTCATTCAGAAAGGACA
GTTTCGTGGTGGTGGCGATCTGACTGTAGCTTCGCCCCCTGGTGGTGGGCAGCAGTAAAA
CAACAACCGACGTCTCATCTCAGGGTTAAATGGGACTAAAGCAGTAAACAGTAAAGCCTC
CTGACTGGGACCTCAGCTGTGTCTGTGTGTGTGTGTCTGTGTGTGTGCGCTGTCTTCCCT
TATTTATTCTGTTTTCCTTATTTATTCTGTTTTCTCTTCATCAGAAACAGTTGGCTTCTT
TATATCTTTTCTTCAGTCTTTCTAGGTTTGCTTCTCTTCACCATCTTTTTCTCACCAGAT
TGTGTCCCCCCCAACCCTCTCCCATCTGTGTGTGTGTGTGCGTGCCGTTGGCCTGTAGCA
AACACACTCCCTGCCAAACCATCTGGGCCTGAAATCTGTCCTCTGCTAAAATCGCTTTAG
TTGCAAACTCAGCCTCGCTTGTTTTCAGATGAAATGTCTGTTTTTTTACGTTCCCAACAG
TATCGCTCGTCCTTTGCTGCAGCTTCAACGAGTTTAAAACACAAACTTCCAAATCCCCAA
AACCAAGTTTTTCTCCCTGCTTGTGTGTTTGCTAGGGCTGCTACCGCTAACGTCCTCACA
CTGCTGGAGCCCTTTTCTCTGGTGTGTGCATATATGTGTGTGTGTGTGTGGGTGGGTGGG
TGGATGCATGGATGGATGGATGGATGGATGGATGGAGGGATGATCTTACATCATGTTGTC
TTCCCCGTCAGCCTGGACTGTGACGTTGTCCTCCTCTTATCGCCTTCCGCTGTGGACTGT
GGGAGGACAGATCAGGTTAACGTGGTTTTAGTTCTTCTCATTTCACACAAATTTAATAGA
AATGTTTCAGAAACAAAGAAGAAAGAGTGGAAGTGATGGAGGGAGAGAGAGGAGTGTGCT
AAATGTGGTGTCAGAGCATTGTTGAGCTCCACTGAGCTGCCTGGCTTGATTGAATTGTTC
AGAGTGATTTGGGAATCTGTGGCGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTAAAACAC
AAAAGAACATTACCTTGTAGCTGCCTAGAGGTTTCCGCCCTTTTCTTCTTCCGCTTTCTG
CCCATCATTAGGGTGAACACTGCATCGAAAATGGCAGGTGGAGGTAAAACCGTGTGTAGG
CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGCTCATTGCTCTACCATCTTCTCCT
GATAAACAGTCTTTTGTTTCCGCCTGCCTCCTGTGGAAAGGCTGCTTCCAGTTCTCAAGG
TGTGGGTTCTGCTCTCCGGGCTGTGATCAGCCGCTTTGCATTTCAAATGAGAAATCTACG
TCTCTGACATGCAAATGAAAGATGTACGTTGAGCTTTTACTGCCAGCTGCTCTGGGGGGC
TGAGGAGATGCCTTCAGAGCCTGGAAAATCAGCCTTTTGGATTGTTCCCGGCAGAAATCT
ACATCTCGTGATTAGTCAGAACCTTTCTGAAGGTCCAGACTCCAAATTCTGTGTGGATGA
GGTCCTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGA
GAGAGAGAGAGAGGCTGCTGCCCATTAAAAGTCTCTAAATTTAGATGTTATAATGTTGCT
CCTGTGTTTTCTTACAAAGCATCTCTGACTCATCAGGTCTGTTTACTGACATTTCCTCTA
ACGAGTTTCGAGCGCCGACGTCAATGAAGTTGAAATGGTTTGGCAACAATTACCCCTCTA
ACGGTTGGAGGCATCAGTGTGTGAAATTACACAGCACCACCTCCGGTCTCATCACTTTTC
TATAAATAAATCAAAGCTTTCTTGTATTTGCACTCAAGCTGGGAAGGCGTTCAGAACAGG
AAGCGTGGTGGCGGCCGCGGCGCTCAGCCCTCAGTGCTCAGCTGCTAGCGCACAAACAGC
CAGGACACACAAAACTCACGTCCACCTGTTAGTTAATGAGCTAAATACCTCAGGACCAGG
ACGGGTTCATGATTCCATCCATACAGACGGAAACGAGAACGTTAGCTGGATCTGGGGCAG
CGCCCCCAGCGGACATGTGGCGCACAGCAGTGAAGCGTCAGGGCCCAGAAGGACAAACGG
GACACACACACCCACACACACCCAGAATACCTGCATGGCTAAATACTGCAGCCCTTCACG
TGTAGAAGGTGTCCTCCAGCAGAGGGGCAGTCATCCACAGGAGACCTAGCTCCAGGTATT
ACAGCCACCCCAGCAGTTAGCTTAGGAACAACAAAGAGAACAGAGAACTCTGAGAAGAGG
ACCGTGGACCGCTAGCGTCTGACCCGTCACCCCCAGATAAGCTGCTCTCGGCTGTTCCCG
CAGTGTCTGACGGAGAGCGGTTTCGGACCCGTCACCACGGAGATCGCAGAGGCCCAACCG
TTCTACTACGCTGAGGATTATCACCAGCAGTACCTGAACAAGGTCCCTGATGGCTACTGC
GGTCTGAAGGGGACGGGCGTCTCCTGTCCG
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