SelenoDB
Release 2.0
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Transcript Report for SPT00002672_2.0
Identity
TranscriptSelenoprotein J (SelJ)
SpeciesTetraodon nigroviridis (Tetraodon)
Transcript IDSPT00002672
Transcript release2.0
External IDNone
Gene SPG00002579_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002672_2.0 # Transcript # Selenoprotein J (SelJ) # Tetraodon (Tetraodon nigroviridis) # Full length # Forward
ATGGCGTCGGCTCTGGCTGACAGAGCAATAGGAGCCATTGTGGGATCAGCTGTTGCAGAC
GCGGCAGGTAAGAACACAAACATTCACTCTTTCTGTACTTTTACCTTTAAAATTTTGGAA
ATAATGAAATATCTCAAAGAGGCGCGTCATCATCCGCAAAAGAGCTGTTTTTGTGTACAG
ATCAGCTTTAATGTAGAGAAGTTTCTGCCTCTGATGGTCATTGACTCGCTGCTTGCAGCT
CAGCCCCTCCACTGGGTTTATGACCTCCAGAAGCTGCACCTGATTCTGGCTCAGGATCCA
AACCCTGAATTTCGGGCCGAGTCTGCAAACCCTTTCTACAGGAGGCAGACGGGCCAGCAG
AGTTGCTATGGCGACCAGGCATTTGTCCTACTGGAGTCTTTATCTGAATGTGGAGGTAAG
ACTGTCGGTGGTTTCAATCGGTGTGTGTTGTCGGTAGTTTCCGGTTTGTGCGGCAATAAA
ACCTGCGACTCCGGCTTGTTTTGTGTCATTTAGGTCTAAATGTGGAGGACCTGAAACAGC
GCACGCTGAAATTCTTCGGGCCAGGATCAGAGTACGACACCCCGGTCAACAATCCCTACA
GAGAGAGAGGAGGCAGGCAGACGTGTTTTTCGGATATCTGGTGCTTTTAAACATGATCGC
GTGTGTAGAAACGTGTTTTTTGCAGGGCCGCGTCCGCAGCTGCCCATCGAGGGGCCGTGG
AGACACGCGAGTTTGAAGAGCTTCCTGAAGAACGTGGATGCAGGCCAAGAGGAGACGGGT
AAGCCTGCGGCGAGTCCGTTTCTGCCATCAGAGTTCAGAACCACGTTTGTCCTCAGGGTG
CGAGAGCGATTGCCAGATGGACGGAGTAACCAAACTGGCCCCCGTGGTGGCTTTCTATGC
CGGGAAGCCCGAGATGCTGGGAAGGGTGGAGGATGCGGTGCGCGTCACCCAGAACAACGA
CGCCTGTGTGGCCGAGACTTTGGCAGCTGCCAGGTGAGGCTGGCCTCCTTTGGCGCCCCA
CCTCCGGAATGACACACCCTTTTCCCAGGTTCCTGGAGCACTTCATACTAAACGGGCCGG
ATCCAACAGCCCTGGAGTCGGTGATCCGTCAGCTCAGAGACCCCAACCGGAAGCAGCCAC
AGGATCTGGATCAAGCCGTGGTCGGTATGTGGGGCCCCCAGCACTGGTGGAGTCATGGGA
CCGAGTCACGAGACAAAAGCTGCGCCTTTCCTCTTTTTTGTGAACGATATGCTGAAACGG
CTCGTCCCGGTCGTCTCAGTAAAGGAACTGTTTTCATTGGCCCAGCAACATTTTTGCTGT
CTTTCTGTGACTGTTTCCAGGTCACATTCATCAGGTTAAGGAGAACTTATCAAAAACTCC
CCAGGAGCTAATCCCTGCTGTTTTTGTGAACACCTGAGGTAACCCCACTTAAAATATAAA
AACATACTAGTCATGGTATATAAATCATAAAAAAGTACCTAAAATGGTGTAGCCTAGTTG
TCTTGAGTGAGCTTGTGGTGTTGGTGTTTTCCAGGTTTGCCAGGTGCATTCCAGGCAGCG
CTGCATGGGGTCCTGACAGCCACCAACTATGTGCAGGCTGTTCGAGACACCATGAGCTGT
GGCGGATGCACCTGTAGCAGAGGCTCCTTCATTGGAGCCTGTCTCGGGGCTCAGGTATAC
GTTTAAATCAACTTCCAGGCATCTTATTTAACATTTAGGCACTTTTGTACAGCTGGTTTT
ATGTTTTTATTCCTGCAGGTTGGTCTTGAGGGGATTCCAGCTTCGTGGTCATCCAGAACT
CTGCGTTACGAGTCTGTGCTGGAGCATGCCAAGAAGATAACCAGCCACCACCAATAATTA
TTCTCTCTGAATCTGGTTGGGAACAAGGTGACGACTGCGGAGTATTTTTACACAACGGCC
CATGAAGGTTATTGTCTAAAGAGTTTTAATGGCAGTAGCCGGATGTTTTCTTGTCTGTA
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