SelenoDB
Release 2.0
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Transcript Report for SPT00002697_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesTetraodon nigroviridis (Tetraodon)
Transcript IDSPT00002697
Transcript release2.0
External IDNone
Gene SPG00002604_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002697_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Tetraodon (Tetraodon nigroviridis) # Full length # Reverse
TCAGGACATGGAGGGCACGGGCGAGTCCACAGAGTCCAGAGGCTCCCAGCGGCTGCTCAT
CAGGGCCTCGTAGAACTCCTCGCTGCGCTCCACAAAGTCTCTGTTCCACTGCTCCACGTC
ACACTCGGGGATGGACTCTGAAAAACAGCGGGGCTACACCTTCACATCGGCGCTCCACAC
CTCTACCTCCACACACGTGCCTGCTGTTCAGACCTTCGGCCTCCTCCTCCTCCTCCACGG
GCCCAGAGTCCTCCTGGTTCTGCTGGGGGGAGACGTCACTGAGTATGCTTTTCCAGTGGG
AGCCTGAGGGCGGCGGCCGTGTGGGGCTCCTGGCTCTCACCTCTGCAGCTCCAGACATGG
CGCTGGACGGCGGGGGCACCCCCATGGGCGGGGGGGGCATGTGTCCGGGTGGGGGGTATC
CGTAGCTGTAGTTGTAGTTGTAGCCGCTGTTGTAGCCGCTGTTGTAGCCGCTGTTGTAGT
TGTAGCCGCTGTATTGGTCGTAGCCCCCCCACTGGGAGTAGTAGCCCCCCGGAGCCATGC
TGTTGTTGCTGCCGTAGTAGCTGGAGGGGGGCTGGTTGTAGCTGCTGTAGTTCTGGCCCG
GCCCCCCCTGTGAGCTGCTCATCTTCTGACTGCAACGCAACAAAGAAAGATGTTCCCACA
TGCTCACACACGAGGACTGTTCTCGTTACCTAGGAGACTGTTCTCGTTACTTGGAGACTG
TTCTCGTTACCTAGGAGATTGTTCTCGTTACTAGGAGACTGTACTCGTTACTAGGAGACT
GTTCTCGTTACCTAGGAGACTGTACTCGTTACTAGGAGACTGTACTCGTTACCTAGGAGA
CTGTACTCGTTACCTAGGAGACTGTACTCGTTACTAGGAGACTGTTCTTGTTACCTAGGA
GACTGTACTCGTTACTAGACTGTACTCGTTACTAGGAGACTTTCACCCGGACTTGTTTTT
CTTCGAAAACGTTTCGGGTTCTATCCAAAAGGCTTCATCGGTTCTGATGGGACTGGGAGC
AGAGCTAGCAGATATATTAATCCAGACTGTACTTGTTATTTTTCCTGCATATTATAGTAA
CAGTCTGAGCTCATTGTACTTTAGTATTTGAGTTTCCGTATCGGTGTTTTGGCTGTAGTT
TGGGTCTTTTCCCTGAACTTGCCTGCCCTAGTGTGTCTAGGACATCTGATGGAGCTTCCA
CACAGATGCGTCTGTCCCTCACAGACAGAGGACAGAGGAAACAGCTGAGCTGAGAGCAGT
TTCTGGAGTCCTCAGCGGCCGGTTACCTCTTGGCCACAGCGATGCTGAGCCTGAGGGCCT
TTCCGCTCAGCACGGTCCCCTGGCACTCCTCGATGGCCTTCTTCTGCTCACTCTCCTCTC
CAAACTTGACAAAGCCGTAGCCTCTGCAAGCCAAACAGCAGTTACAAGCCCTCTCTACAC
CGCTCAGCGCTCCATACTTGGCATTTAACATCCACTTAAAGAGGAAATATAATGGGTATT
ATTATGGTAGAACTGAAACTTGTTGTTTTACTTTTAACATGAGGTAGCATCACTTGAATT
GTGAGTTGCTCTTGCTTAGCCTATATGGGGAAAACAATAGTTTTAGCATAAGATGGTAAG
AAAACAATTGTTCAGCTTCTGTCGACAATACAAGGTTGCCGACGTCCAGAGCAGTTCTAT
CTACAGAAAGAAATTACAGAAAAGAAAGCATGACATATAGGCAGATTACAGCACGTTCTT
CAACCAGAATGTGGTACTCAACACAGAAAGCGTGTGTGCCCGGTGCACGTGTGTGCTGCG
GCCCTACCTGGAGTACCCGTACTGGTCCGTGACCACTTTGGTCCCCTTGCAGGAAGGGTA
CTTCTTGAAAACCTGGTGCAGCTGGAAGTCGTCCACGTCGGAGGCCAAGTCGCCCACAAA
CACAGAGAACTCGGGCCTGTGAAAAGCACAACGCGGCTCACGCAAAGCCTTTGAAATGAC
CACAGCTTTCATGAAAAACAGCCTCCACTCTCCCGGAGTCCCTTTTCGGGGGCGTTTATC
TGCGCACGATTCTGCGCAGCAAAAAGGGGCAGAAACTGAGAGGATCTTACCCTGCTTCTG
GTCGTTTACCATAGGTAGCATAGTTGAGCTTAAACTTTCTTGGCTGCAGGGAGAAAGAAG
AAAATTGTCATTAATTGGAGCCCAAACGCCAAAGGAGTGTAGTATAGCAGTGATTATTGC
TGAAAATGGAGAGTGGCGTTACTGTGGTCATTACTGGGTTTACATACCTCCACCACTCAG
AACAGCCTTTAGCCTTTAGCCCCATTCCTCAGTTAGCTCCTACCAGAGACTATTCACCAG
CTTCAAACAAAGTACATACGCGAGCGAGCAGCCTGTCAGCCGGCGGCAGCGGGGCCAGAT
CACAGCAACAAGGAGCTAACGCTCACGGACACACCAGGCCAGAAGGATCACCAGTCTGGT
TCGCTGTCTCCTTACACCAGCACCTCCAGCCGCGCAATCGACATCCTCACAAACCGCCAC
AAACAAGGTTCGGAACCACCTTCCAAAAGCTCACTCAGTCTCATAAACATTTTAAAGCAA
AGCAGATCTTTGACAGTACATTTGGGTGTTTGTAGCAGGATAAAGATGAAACAGTAACCA
TAATGAACTACAGGGTGTAACGTCAGAGGAACCGATGGTCTCTCTGTTAAAGGTTTGGGT
CAAACGTGTCTGATGACAGTAGTTTGACCACCAGCAATGACAACACAACAGGAGCCCAAA
AAGGACTTCTAAACTTCATCTGCTTTATAGTCAGATCAAAGAAAAGCGAGAGGCGTTGAC
CTCCGGTGTCTACAAGCTAATTACTTGCTATAACGTGAGAGCCAGGAGGTTCATATTGAA
AGGTGAACGTATAGGAAAACCAGCTTTGGACGGCTCCAAAGACTGTTTAGGACAGGAGTG
AATGAGGTCACGTCGGAACTAACCGGGTTTGATCCGGGGACCAGTTTTCCGTTGAGTCTT
TGGACACAGCGCTCCACACTGGCTTCGTCAGCCAGCTCCACAAAGCAGTATCCTGCCGAA
CCACTGCAGGGGACAACCAGAAAAGCGTTGGCCTACAGCGCAGCGCTGGCGGGAGGAGTG
GACGGGGTCCTGGGCTCAGCACCCACCCGGTTATCCTGTGTGTGATGATTTTGACTCCGG
TGGGTGATTCTCCCATAGCACTAAAGGCCTGCTTGACGAAGTCGTCATCCATGTACGGGT
CCAA
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