SelenoDB
Release 2.0
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Transcript Report for SPT00002714_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesTupaia belangeri (Tree Shrew)
Transcript IDSPT00002714
Transcript release2.0
External IDNone
Gene SPG00002621_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002714_2.0 # Transcript # Selenocysteine synthase (SecS) # Tree Shrew (Tupaia belangeri) # Full length # Reverse
TTACCTATCGGGGACCCGAGGAGCAAAGCAGGACGTCGTCGAATGCACACACAGGACGCA
GTCTGGCCCCAGCTCCTGGATCTTCGCCTCCACCGCGTCCAGGTCTGTGCGCAGCTCATC
ACCTTCCAAAACGTTCTCTATCACCACCGGCTCAAAACCTAGCCAAGACGACCCAGATCG
AAAGGTCAGTGTGAGCTGCAAGAGCAGAGGTCCCGGATGTAATCCCAGTCTATGCGAGAA
CTCCAAATATCTATTCTGGTCAACGAGCCTTTCTCTAATAATAAAGACCCAATAAAGGGC
CTCAATCAAAAGCAGGTCAGTAAATGTGACTAGCCAATCAGGATCACAAATCTATTTCAC
ACTTTGATAAAAAGAAAGAAAAAATCTGAAAAGGAAAGCACATGTTAAATGAATATCTAA
GAAGCAGAAACAGAAACTGATGACAATGAGAATCACTTAATCTAGTCCAACTTCAGTCCA
CAGAAAAGTCTGCTCGTTTTGGGGTGATATTTCAGTTTTATTTTCAAATATATTTTATTT
CAGAACACAAATAATAATGTAATTCAAGTACTGAAATAAATCACAGCCATCATTTAAAAT
GAACACCTCTGTGCCTGAGGATCAATGACCCATCTCCTAGCTTACAAGGGCCTTCCAAAA
TTTAAATATGATTCTTTTCACGTTTTCTATTGAGATAGTACACTCAGCTAGCATATAATC
AAAAGTACCTCCCATGAATAATAATTACACAATCTTTATGGTAAACATTTAGGTATCCAT
AAACTTAAAGCTCGAAGTGCGCAAACAGGTACACTTATCTTGATGTTATACACATCTTAG
CACAAATGAAAAAAGGAACAGGGAAGAGATCTAGCTCACTTTTCATCTATCTATCTCCAT
ATCGTTGGAATCTTCCAACTGTGACCTTCGAAGCATTCTACACGAAACTCTTCTTTTACC
TGCAGTGACCATGGACTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATGATATACTT
TGCCTTTGGCCTCTTGTGGCGTAACGTTAAGAAACACAGGGTTAGACTCATGCCAGTCGC
CATAGGAACTACGAAGCAGTTGGCCACCGTACGGACACCTGCAAATCAGAGGAGGCAGCA
GAAGAGAAATGAGCTGTCCCGTGAGAGCACCAGCGCCCTTCCTGAAGAAATAACGCATTT
CTTCCCACGAACAGTAAGAGTGGTCCAGAGCTGCTTCTCCTTCACGCATCCGCAGGAAGC
TCACTGCAAAACTCATCCTCCAAGCCTCGGTCTCTGCTTGCTAAAAGGCTTTTTTATGCA
TGTCTTTTCAGAAACCACTTGTATTCTTTTTGGAAAGAGGCAGTAATAAAAAGAAATTAG
GGGGACCAGAAGTTGGTGTAATGGCTACATAGCTGGACTCCCATGTAGTAGACCACTGTT
CGAGTCCCAGACCCAGTGGCTTAAACTCATGCTGGGCGCGTGTGCGTGTGCACCCAGGAT
CCCAAGAGGAGAATGGAGGAGAAGGGATTGTGGTGTGGCCATCCCCCCTGGGGGGTGATT
TCTTGCTTTTTTGTCTCTCTGTCTCTCTGTCTTTCTGGTGAGTGCACGTGCCCTATAGCA
AAAACCTCTCCCCCCCCCAAAAAAAGGAAAGAAATTAAGCAGAAGGGTGCGTGTGTCTGG
GCAGCTAGAGCTGCTGTGATTATTAAGTACATACCAGCCAGCTTTAGGATGTCCAGGACA
AAGAATTGGTATTTTATTCAGAGCTGCAGCCCGCAGCCTTTGTGCACGCAGAAATATCCC
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGGGAATGGAGAAGAGGATTTCAGCATT
GTCCATCTTCCCCTTCCCCACCATCGGGGACCTGATTTCTCACTTCCCCCTCTCTGTCTC
TCCAGCGAGCACACGCACCCTATAATAAAACTCCCTCAAAAAAAGGAAAAGAAAAACCTA
GTGGAAAATTCACTCAATTTAAACTAGATGATATACATTATTTAAACCTACCTCTGAATA
GTCTCTAAGTTAAAAATCTTTTTGATTGAATAATTTGTAATCTATAGCCACATACATGAG
AAATGTCACGCCATGGATTATCACAGAACACAAGCACTGCATTTTCTTACCGGTGAAATC
TTATGTACAAAGCAAGTGTCACGTAGACTATCAACCCTGTCATCGGCCTACTGTTAGCCC
TGAAATTTTCATCCACGCTCTGTATTTGTTATGATTAGCTTCGACTATTATGGTTTCATA
TCAATAAGATTCTACTATACCAAGAAATGTTATATGATTTAAAATCTTGAAAGGCAAGAG
TTATTTTTAAAAGAGTTTACATATTTCTCAGTAAGGTTGGAGGACAGAGAAATAAATTAC
CATATTTAGAAACATTGTTAATAAAATAGTTACACGAAGTAACGGAAACCTTTCTAAAAT
AGTGCAAAAGAAAACAAGTGACTTAGTCTAACATACTTTTCCGATATATATCGATATATA
TCGATATATATCGATATATATCGATATATATTGATATATCAACAAAGAAAAGTATTTATA
AAATGAATGGGATTTGGGGCCAGCCAGGTGGCATGGTGGTTAAGTTGGCTGGATCCCGCA
TGGCCAACTGTATGGGTCAAGTCCTGGACCTGGTGGCTTAAAAATATGCAGGGTGCATTT
ACCAGGTCTGGGACTCAAACCATAGTTGACTATGCAAGAATCCAGTGACATACCTGTTAT
GCCATCTGCCGGTCCCAGGTTAGACATTTCTCTTCTTTTGAGATTTTACTATAGTTGTGT
GTGCGCTTGCCAGAAAGACAGAAAGTGAGAAATTAACCTCCCCAGGGGGAGGCAAGGATG
GATAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCATGAGTACAAG
GCGTGGGTCGGGGAATGGAACCCCGGTCGTTCAGCTTCTGCCAAGTTCCAGTCCTCGTAA
TGGTTAAGCCGCCCTGTTAGTCCCCCCAGGCTAGACGATTTAAAACACAATGTAAGGTGG
CCATTGTAAACCTTCCCGAATCGAGCTTAGGAATCTACCTTGTATTTCTTTAAAGTCACC
CTGCTCGGGGTAAAACTTCAAAACTAAATACATAAATAAGCCATGCATACCTGTAATGAC
GACGGGCAACTAAAGGAAGAGGCCACTCTGCCTTCTCTTTCTCCCACACCACAATTGCCC
AAGAAGTTATTGCTATCCATGATGGCGAGTTCATGTAAAAAGAGCTCAAGTGTACTTTCG
TCCCAACCATCCTCTGGACACTTGCCCTTTTAAATAAGTAAACAGAGTTATTTAACTACA
GCTTATCGTTTTATTTAAGAAAACCACGGTTCTCTAGAGCCCTGCATCCGTGAATTAAAA
CTTGTTCATGTGTAAATTGTGCCATGGCCCTTGCTTTTTAACATTCAGATATAAATCCAG
CACTAGGAAGAAATCTGGAATCGGCAAAACGTTAGTGTCACATGGGACAAGGATTTCCAG
GAAGTGATGATAATAAAGGCGTACGAACTTTCATCAGATTTTTATATTTCAGCAAGTAAC
TGAAGATCAAAACAACTAGGGATTGTCAAACTTAGAGAAATCAAAATGCGGGAACCCCTG
CAGGGGCGAGGTCTCGCTCGAGCTTTGCAAACATCGCGTGTCGCTGGAGCTCGTGGGGGG
CGGCCAGAGCCACAGGTGCAAACGTGGCCCTTTCTGCACACGCCTATGTGAAGCCACTGG
GACGCTGCCTAGGTCTCAAACGCCCGACCCCCGCGTCCCCAAGGACGCCCCCGTGGTTCC
GCGGGCTGGGCGTGCGGGCTCGGGCGACGGCGGCCGCGGGCGGGCGGGGGCCGGCAGTCG
GTACCTTCTCCAGCAGCAGCCGGATGAGGTGCTCGTGCGAGCGGCGAGCCTCACAGCCCT
GCCGCACGTACGCCGGCGACACCAGCCGCTCGCCCGCCGCGAAGCTCTCGCGGTTCAT
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