SelenoDB
Release 2.0
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Transcript Report for SPT00002842_2.0
Identity
TranscriptSelenoprotein R (SelR)
SpeciesVicugna pacos (Alpaca)
Transcript IDSPT00002842
Transcript release2.0
External IDNone
Gene SPG00002749_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002842_2.0 # Transcript # Selenoprotein R  (SelR) # Alpaca (Vicugna pacos) # Full length # Forward
TCCAAGAGCGAGTGGCAGAAGAAGTTGACTCCCGAGCAGTTCCACGTCACAAGAGAAAAA
GGGACGGAGCCAGTAAGCCACCCTGATGTACAGTTTCTGGGTCTATGTGTTGGAGTGGGA
AGGACAGACTAGAATCTATCTCACTACAAACCCTAACTCGTCATCTGCTCTGCAAATCTG
GTCCCCCAGGCTTCCCGCATTTTTCTCTGGGCATCAGTCTCCATCCAGCTGTACAACCAA
AAACCTTCCTCTGGACAAACTTTCCTCCATCACCTCCTCAATTCACTCTGCCTGTGGGAT
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAATGTGGTGGAATTCC
ATCCAGCTGTACAACCAAAAACCTTCCTCTGGACAAACTTTCCTCCATCACCTCATCAAT
TCACTCTGCCTCCTAAACAGCCTTCCCATCCCTCTACGTCTCCCTGCAACCCCCACATCT
ACACTGGTCCAGGCTCCCACCATCTCTGGCTTGGGTGCAGGAGCTTCCAGCTGGTCTCCT
CACAGCTGTTCTTGCCCCTCACTGCGCCGTTCTCTGCACAGCTGCCAAAGAAACCTTCTG
AAATCTCAGATCTGACTACATCACCCTCTGCTCGAAATTCTTCCCTGGCTTCCTACCACT
TTCAAGGTAAAGAGAAGAGTTTAAAACTGGCTAAGAAGGCCCTAAAGGCTCTGGCCCCTA
CCTCCCACCTGCATCCTCAAATTGGGTCACTTTTCCTCTTGACCTCTGCCCTTGGGCCAC
ACTACCCTCCGTTCAGCTCTCAGACACCCTGGGCTCCCCTCTGCCTTAAAGCTCTTTCAC
CCTGAGTCCTCCCCGGCCCCCAGCCTCACTCAAATCTACCTTTCGGCTCTCGGCCCCCAT
CTCACACCCACTGGGAAGCCCTTCTCAACCCCTAACTGGGTTTGCTTTTACTTTCCCTCG
TTAGCACTTGCCGTCATCAGTACATCCCTGCATAGAGCGTGGTGCCTGGCGATAGTAGGC
GCTCAAAAAATAAGTGGTTGTGAATGTCGAGTGACTACAGGTCAGGAGGTGGACATGTGA
TTGAAACTGCATTCAGCAACTCGGCTTTCTTTCATTTCCTGAGAGACCAGCCCTCTGTGG
TTCCTCATTATAATCCCATTTTCACAGTGTTGCGTTTCCCAGCAAGTAGTCTGTCTTAGG
CCCAAACATGGCCTGAATTTAGCAGTCCCTGCCAAATTCTGGACGCTGTGCATGTGCTTA
TGGACTTATAATCATGGTCTCACCCTCAACTTCAGCACCGATGCTAAAGCCATTGGACAG
GCCAGCAGATCCCAGTCGATTCTCATGAAATACTGGTATTTTTGAAAACTTCCTGAGGGT
GGGATTTTAATAAAGGCTTCAGTGGGCAGGAGACCACATTAGCCATTGCGCAGATAGCAC
CCGGGAGCCACACGTGGTCCTCTGTGCGGTGGTGTGTATTCCCAGAGTAGTCTATGCCCG
CCCTGTCGGAGGGGCAGGGCCAGGCAGGGTTCGGAGCTGGAGATGGCATCCTGGAGACGT
GCCAGATGTTCAGCAGCATAAATGTGTCGGAGTCTCAAACAGATGGCATCATATACTCTG
TTCGTTTGGCTGTTTTACAAAATGAGCGTCATCCATTATTTTAAGTGATGTTATAAACCC
CTTTCAGCTGATCCGTCTCCACATTGAACTCTTCAGAATGTTGCAGAACTACGGCCTCAG
TCAGCTCTGTGGGGCCAAGGAAAAAGAAGTAAGACATCTAAGCTTTCTCTTTGGTGACTT
CAAGTCCAATTGCACATGGTTTCTTACTGGGCACCAGTAATTTGCTAGCCCTCTGCTAGG
TACAGTGAAGGGGTTTACAGCCTGGTTGAGTGATAACTAAATGTCAAATAGCGATAGAAG
GCAGGTTTTGTGCGCATCCTTCTTTTCATTCCAGGTCTGCCACCTGCAGGCTTCACTCTG
CTCTGAGCTCTGGGAAGACTGACCATTCAAGGGGACAGGCCGTAAAATGACCAGCTCACT
ACTGTTCGGGTGTCTGCAGCCAGTTTAGGGTTCTTAAAGAGGGAAAACATCCAGATGTGC
CCTTGGTGGACACAATAGGTCAACTTGAAATTGTCCGTTATGCAGCTCCCTGAAAATGTG
CTCTTAATCCTCCAACAGGGAGTTGGAATGTCTGACCTGTGGATCTGCTGAGGTGGGAGA
CCCAGAATGGGCTGAGAGGGCCGCTTCCTTCCCGAGTCAGCTCTGGGACTTGGTGACCCA
TCCTGTGTCTCAGTTGCTTTTCCATAAGTGGGGACAGTGGTTGTCACCGGACACCGCTGG
TGGATCTTCACAGTTGGCTCGTGTGAGAGTTTCTTTTTCTTGAATTTTCTTTGACAGAGG
AGATGACAAAAGGAATTGGACAAAAAATAGTCTTTTTCCCCCCAATGAGGTCAATTTACA
AACTAACATTTTTTTTTTAAATATTAGATTTGGCTCACTCATTGCTTCAAGTCTCCTTGT
GTCCCTCTTGGAACCTGCAAACTCTTTAAGCCACAATTAATATAGTAATTTCATCTGAGT
AGTAACTTAGGCACTGGGAGAATCTAGCTCATTATTTGGCATTTATTAAGTATCCTAAAC
ACCACGTGAAGCATACTAAGAGCACAACCCCAATCTCACTGGGCTTTGGTTTTTAATGTA
TCTCTATCCTGTCTTTAATGGGAGATTTCACAGTGTTTCAGACAGCAGACTTGATTTCTG
TTGTACTAATAACTCTTAAAATGGAGACCGAGATCTTACACAGTCCAGAGGCCCATTCTC
TTGTTTTTTTCACAGACTTTGATGTTTTATTTTTTTTAAGGTCTTTTGAAAAAAAATTTT
TTTAATTGAAGTACCATCAGTTACAATGTGTCAATTTCTGGTGCACAGCACAGTGTCCTA
GTCATGCATATACATACATGTATTCATTTTCATTTTTTTTTAATTAAAGGCTATTACAAG
ATATTGAACATAGTTTCCTGTGCTATGGATTTGATGTTCTTGGATGAAAGTTGCTATCTA
AATACAAAGCATGATTAACGTCATAATTTGAATATTTGCTACCATGTAGGCCAGTTCGTA
AACAAGCCTGCAGGCTGCTTCCCTGGGCACCTGGTAATGTTCCTTCTGGTAATATTTGCA
CTTTGTCAAATTAGTACAAAAATTCCTTTATTTGGGGACTTAATCTTGGATTTAGATCTA
CTGTATCATGTCCTGCCAGTGTTATGAGAAACCTGAACATGGTGGATCTAATTTACTTTC
AGCCTTTCAGTGGAATCTACCTGAATAACAAGGAATCAGGGATGTATCACTGCGTGTGCT
GTGACAGCCCACTCTTCAGGTGAGAGAAAGGATCGAGAGGTACTGAAAGAAAATAAACCT
CTAACTTCTTACAGCTCTGTCTCTTTGCGGCCCTGGATAAATACATCCCCATGTTTTTAA
TTGCCTATCTCATTTGGCCTGGTTGCTATAAAAAAGGGCTATACATATAAAACTCTTGCC
TGTCTTGATTATTTCTAGCATTTAGAGCAATTCACAAGACTTAGCCTATGTTCTTTCTTT
CTGTATCTCCAAGAAATAACAAAAAAATAAAAATTGGTGGGCACCTTAGGATAAAGCTAT
TAGAATTTTTTTCTTGGGGAGGTATTTAAAGAAATCTGAACCATAATGGCATTTGCCTGG
CCATGTGATTAAAACTGTATCTCTCCCAGGAAAAAATGGGTTTATAATTTAATTTAAGAA
ATGTAGAATTTTATGAGGATAGATTCGCCGCAGTGCTTGACAGCAGTGAATACCATGCCC
TCTTCTGCATAGCTAAAAGTAAATTTAATTGTCCCTTGATTTCAAAGCCTCTTTTAAGTC
AATCAGGGTCTGAAATCTCTCAACAAAGGCTTTTTTGTTTAGACATTCAGGAAACAGCCT
TAAAAAAGTAGATTCGATGAAGAAAGGAAAACATCTTTGAAGTCCTATTTTTCAGAACTT
CAAAGATGTTTTCCTTTCCTCCACATCAACCCTAAATTGGTTTAGAATAAAGTATAAATC
AAGCCAGCTCTGTGAATCTTCCATTAGGCACTGCTTCATTTGGGTTTTGCGCAGACCCGG
CTTCCCTGAGCTGCTGGCTGCTAATGTGGGCTGAATCTGGTAAGCCAGACCCCGCCTGCA
AGGACGGTGAACGATTAAGATTGATTTTCCTTCATGCTCACGGAAGGACGGGGCTTTGCC
CAGATTCACTTATTCTGCCAGTGGCTGGTGAGGGGACAGCTAAGGGGGCAGTCAGCCCAA
GATGGCCTGGGGAACGCTAGGAGACGTAGGTTAAGTTTGACATCGTAAAGTGAGTGCACA
TTTCTGAGCCACTCGTTACTCTCTGACCTTTGGTTCTGTTAGAAGGGGAGAATTGGGATG
TTGAGATGGCCAACCTGCTTTTAGCCAAAGAGCCACGTTGTGAAAGTATAAAGGACGGCC
TTGTGACTATGTGGTAACCGGCCAGATGTTCTGTTTCTGTCTTTAGACTGCGAGAGCTAA
AAATGCAAGATCGTTCTTACAAGAGTGTGTTCCTGCCTCTTAAGTCTTTGGTATCCCAGT
TTCTGCAGCTGTAAAGATGACATTTTCTTCCTACCCCGTTCCAGCCATCCCACCCCTCAC
CAAGCACACTCAGTCAGGGAATCACAGAACACTGGGGCAGGGAGGGGCCTGAGAGATCAG
AGCAAAAAGCTTTGCCCAGTAAAACTTTCTGCAATGATGTTCTGTATCTACTTCTTCCAC
TATGGTAGCCACCAGTCACATGTGGCTGTTGAACACTCAAACTGAGGCTGGTGGGACTGA
AAAACTGAATTTTTCATTTTATTTACGTTTAATTAATTTAAACTTAAAAGGCCACATGTG
ACCAGTAGCTACTGTATTAACACAATGCTAGTCCAAATCAGGGAAGTTGAATGACCATCT
TCAGGTCACTGAGGTAGTAAAGTGGCCAAGATTAGCTAGAAAACCAGCCAATTCTCCAAA
AGCCCTTTTTACCAAGTGGCCAGTTTACTGACCTGCCAACTTGCCAGCCTATTTGTTTCC
TTTTAATCATTTAGTTTTAGTTGCTGTTTCCAAATAAGAATATATTCATAAGAATCTTTC
TATGTTCCAGAATGTACTCTTAAAGATGCATTTGTTTATAGGAGAAACAGTGTACTAGAG
TGGTTACATCTATAGATGTACATCCTGGCTCCACTGCTGTGTGGCCTTGGGCAAGTTTCT
TAACCTCTCTGTGCCTCAGTTTCCCCACCTATAAAATGAGGGTGATAGTTGTACTGAATT
CATAAAGTTGTTGGAGGATTAAGTGAATTGTGAGTTAATACATGTGAAAGCACCAGAGCA
ATGCCTGACATGTGCCAAGCCCCCAGTTCACCTTAGCGGTGATATCTTCTTAGAGACAGA
TCCTTCTTAGGGCTGTATACGTGAATGTGTCTTTGATAATGAGGAACTCTTGAGAATCTC
TTCTAATTAATGAGAATCTATGAATGAAGACTCTATTCCTGACGGTGCTTCCCATTCAGG
AGGATAGACAGCCTTACATATTCTTGTTTGACCTCTCCTTTTCCCTCTCTCTCTGTCCCC
AGTCTCCAGCCTCAGTAATGGAGAATAGGGGTAGAGAAGAAATAAACATTCCTTCAGATG
CTTGTACAGAGTCAAAACAAGGTGACAAGTCAACCGAAATGAAATAGTTAAAGCATCAGG
TGGATGAGGGACCACTGCCTCTTGGCCACTGGGCTCCTTGCTGCCTCACTCTGGACCAGC
ATGGTGCACGTCCTGGGGGAGCTGCTGACTCCAGTTGAGAGACTATTAATCCAGGGTGTC
CAGGTCAAGAGCCCCCAGGAGATGTTATCACTCCCTTGGGCACTTCATACTGTCGCTTTG
TTAACCTTGGAATTATGTGACTTTGCTCCCTTCCCTGCTTCCTCTATCCGCCTTCCTCCC
GCAACCCAAGCACCAACTCCGGAAGCGTTTATTAAATTCTACTGCGGGCTCGCGTGTGGG
ATCCTCTAGAGTCGACCTGCAGGCATTCTCTTTTTATATTCTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTGAAGCTCCAATGTGGTGGAATTCTTTGTGGTCATAA
ATCTTCTTAGACTAGAAGGAAACTGAGAGCCTGACGTTAGTTCCTTTTTTACAGAGCATC
CTGACATCCACCCTCCATGTCAGTGACCAAGTGACACATTAACATTTTGTGTGCTTCCGC
TCCTTCAAATTTTTATTTATTTGGGGGGGGGTAGGTAATTAGGTTTATTTATTTATTTTG
GAGGAGGTACTTGGCATTGAACGCAGGACTTCATGCATGCTAAGCAGGCACTCTACCACT
TGAGCTGTATTATATCGCCCCTCCTCCGCTCCTTCAAATTAATGGGAATTCCTCTACCAT
GTGGGTGGCCAGTTATCACCAAGTGCCTCTGCTCTTGGTTTGGGGGACATGGAATTTCCA
GAAATGAAGACACAAATAAGGCAAATAAGCAGATAACAAAACTAAACAAAAGAAACACCT
CTTCGAGTATATGAGTGAAGATGACCCAGAATGGTTTCAGTTTTTCAGCGGTGGGCCTTC
CAATCTGCCAATCATTTCAGTATATATGTTGGAATTTCTAATTGGCCTTAATATTGAAGT
TTCCACTCTTAAATTAAATATGATGGGCCTCTTATATTACCCAGTAAAATCTCCAGATTC
TGTTAATTGCATCAGTAAAAGTTGTCTGTTGCCCATAAAATGTTTAAATGACTTTTTATT
AGTCTTAGATTGATTCATTTAAAAAATTATTATATTTATAATTCTCCATCAACATTCCTT
TAATGATCACTAGTTTACATATAATGTTGAGGATGGAAAAGCTATGGTTAAAAGATACTT
AAAATGGTTTTCTCTGGACCACAGTGGCCTGGATGAATATTTTTGAACCCTTGGGAAAGA
AAAGGAGTTGGAAAGAACCCAATATGAATGTGCAGATATTTCACATTGGGCCCAGGTGCT
CAAATCTCATGGGTATATTATTAACAATAGTAATGATATTAAAAATAATTGCTGCTGACT
TAGGTACCATGTGCCGGACACTATACTAAAAACACTAAAAATAGAGAGAATCTCAGTTTA
TCCTCTCAGCAACCCTGTGAGTTAACAAAGCCATTACCATTCAGAGGCATTATGAGATTA
AACACCTTGCCAAAGTCACCTAGACATAATAGGCCGAGCCTGGATTCACACCCAGGTCTC
TCAGAAGTCAACCGCAGAGTTCCATCTGTGGTTCTTAAAGAGTTCCTGGGATTTTTTAGG
GACTCTTCGAGGTGCTCCCCCTTCTAAGTGCGTAACCACATTCTCTTCCGACACTTCAGT
CAAAATGACACTGCAGCAGCTTGAATGCACAGGCACATATGAAGAGTTGGTTGTCTTTTT
TTAAAGCTAGACATTAAAGAAATCTGCAAAATTATAAAACAATTATAAATCTTCTCGCTA
AAGGTTTGTTTCAGTTTGGAGAATAAATAATCTGTTGTAAACATAGGTTATTTGTGTTAG
CATGTAGTGGATTTATTATTTTTCAAAACAATTTAATGCATACATGTTTTAAAAACCCTC
ACTTGTAATTTCTAACTTGTTAAGTATTGATAGACATTACTCATGTAAACAGAAGCTCTC
AGAGATTCTCAATAATTTTTTATTACAGAAGAGTCCTGAGACCAGGATGTTTGAGAATTG
CCGTCTTACACTAGATGATTTCTGCTGAGGTTTCTGCTCTAAACTCAGCTTCCTTCTGTG
CACATAGCCTAGGGATTTGATTATTTGCTACTTTTTCCCTCTCTTGACTCAGTTTTTTGG
CTTTTTTGTTTTTTGTGTGTGGTGGTTTTTGTTTTTTTGTTTTTTGTTTTTTGGGTTTTC
TTTGCAGAATTTCAGTTCACTTCCCGTCTGTCTTCCTCCAATAGAGAGAGCCATTTCCCT
GCCATTTAAAATTTTTAAATCTGTTTTCCTAGTGCAACTGAAGGGAGCTCATCTTTCAGG
ACACGGAGACAGTGGGTCTTTGATGAGCAGACTTGCTGTTGCCTCCTCCCCCTCTTGCGG
CTCCTCTGCTCCCGCCCCCAACCCTGGAACCCTCAGCATCGTTCATCCCTGTGGGGCTTC
CCCAGGAAGGTCTCTGCGCTGCAGGGATGAGTCCGGGTGCCCAGGCTTATTTATTACCAC
GTGCTCCACGGCACAGCTCCTTAAACCCTCAGGACATCTCTGTAACATAGATATTATTAT
CCCCGAGTTACAGATGAGAAAACTGAGGCTTGGAGAGGTTAAGCAGCTTGTCCAGTTTCT
CACACCCAAGAAGGCAGAGGCAGCTCTTGACTCTCGAAGGCAGGCAGGCTTGTGTTTAGA
CGACCCGAAGTCCCTACGGCTGGTGACGGCTGCTTTGTGCATTCTCGTGCTTCTCTGATG
TGCAAAACTCACAATTCTCTCCTTCGACCACTGTTATTTCATTTTGATTTCCCCCTTTTC
TACATTCAGAACGCATGGATTTGACCTATTCCCTGATATGCAGCAGTTCACAAAGCTTCT
CATGTTTATAGTCCTTGTCAGACATCAAGAGGGGTGCCTTTAGCATCAGAGGAGCAAGAA
ACCTGACGTGACGAGACAGCATCTTTAATAGGGGAGATCAGTGGGCAGAATTCCTGGGGA
GCCGGCCGTTCACGGAACTGGCCCTGGGATCGGGCAGAGGAGGAGAGAATTGGCTCCTGC
TCGGGAGAAAGATGAGTTGGGGGCAGAAAATGCTCTTTGTACGTTGGTAACAGCAGCTGG
AGTGTTGTGAATGTCTGGCACAGCTCTGAGAAGAAGTACTGCTCGGGCACTGGGTGGCCT
TCATTCTCTGAGGCTCACGGGACGTCTGGCTCTGATGAGAGTAACACAGGGATCCTGAGA
CGCGTGGACACCTCGTTGGGACCAGCTCGCATGGAGGTTGTCTGCAAGCAGGTGATGTCT
TTGTTTTGTTGTCCCCAATGCTGCCCCAAGTGCCACAGAGAGCTCTCTTGTTCTCGCACA
TCTGCTGTTAACACCCCAGGAGTGCTTCTGTCATGGAAGCACTTTGGGTTTCTCCCATCC
TGCCACTCCCTCTCTCCCATCCTGCCACTCCCCCTCTCCCATCCTCTGAGCACTGCAGGT
AACAGAAGGAGCCTTTCCTGGCTCTCGCCTCGCAGAGATAGGAGCAGAGCAAGGCTCTGA
AGGAGTCAGTCTTTCATATTCTGCTGAGCAAGGACAGGCAGCATCTGTCCGCCCCCTCCC
CACGCTGCAGAGCGTCCCAACAGGCAGAGCAATGCGGCAAGTGACATCAGTGCGTTGCTC
CTCCCGTGAGCCTGGTAGGAGGGAGTGGCTTAAATCCTGGCAGCAGATTCATTTTGATAT
CCTCAGGTGCTCAAATGTTCTGATTTTGTAAGACACCAGAGGCAAGCAGATAAACACAGT
TTAGTCTTGGCTTCAGTAAACAGCAATAATACCCTGGCTGAAGATTGTTGACTTCTTACC
CAGGAATGGTGCTTCTTATGCATTACGTCCATTAGTCATCACAACAGCTCTATTATGTAG
GTATAATTATCATCCCCATCTTGTAGGTGAGTAGATCAAGGCCTAAGTTAAATCACTTGC
TCACATTCTCAGTGGTTAAGTAGAAAGCTGTTTACCACTACTGTGTTCTGCATCCTTTCA
TTTCTTAATCAAATTCAGATATGATAGACTTTTTCCCCCAACAGTGATGTCAAGGACTGG
AGTGGGGCGGCCATGTGGGGTTCATCTGCCTGGTTTTCCATAAAGAGCCTTGTCCCAGCT
CAGAGATGACGGAGTGTTCTCTCCTTACAGTGCGAAGCTCACCTTGGCCATGTGTTTCCT
GATGGACCTGGGCCTGCTGGCCAGAGGATTTGCATCAACAGCGTGGCACTCACGTTCAAA
CCAAGGAAGCGC
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