SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002877_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesXenopus tropicalis (Xenopus)
Transcript IDSPT00002877
Transcript release2.0
External IDNone
Gene SPG00002785_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00002877_2.0 # Transcript # Selenoprotein N (SelN) # Xenopus (Xenopus tropicalis) # Full length # Forward
ATGTCAGCAGATCTTCGAAAAAGAAAAAAAGACACCACTGCTGACAATGATGCCCCACAG
GAAGCTCAGGCTGAAGAAGAGAACAAGAAAGAAAAGCCGAGCTCCTGCAGGTATAGATTC
CTTTGGAAATTGCTGCTCGGGCTGCTGCTGATCGCTCTGCTTTTTGGGATTAAGATTCAT
AGAGATAATGAGCTGGTGAGGCAGCAGGAGGCAGCACTGAGGACATTAGGGGCAGAGGGC
CTCTTCCTTTTCTCCTCGCTGGACACAGACAATGACATGCACATCAGCCCTGAAGAGTTT
AAGCCAATTTCGGAGAAGCTGACCGGGATTTCCACCACCTCCGACTACGAAGAGGAAGAG
CTGCTAGATCCAAATGGAGAGACCTTGTCCGTGGCTTCACGTTTCCAGCCTCTGCTCATG
GAGACCATGACAAAGAGCAAAGACGGGTTCTTGGGTATCACTCACAGTGCTCTCTCTGGA
CTTAGGAACTGGACTACACCGGTGGTGCCCAATAATGTGTTTTATGCCGGACAGTTCAAG
GCGTTCCTTCCACCCAAGAACAAGTTAGAGGTGGGCAATCCTTGGTGGATAATCCCTAGC
GAGTTAAGCATATTTACAGGGTACCTGCCTAATAACAGAATTTATCCCCCGCCTCCCAAA
GGGAAGGAGGTGATTATCCATAAACTTTTGTCCATGTTTCATCCGCGTCCTTTTATAAAA
ACACGGTTTGCCCCTCAAGGCTCCGTAGCGTGCATCCGAGCCATCAGCGATTTCTACTAC
GACATCGTTTTCCGGATTCACGCCGAGTTTCAGCTCAACGAACCTCCAAATTTTCCTTTC
TGGTTCTCCCCCGGTCAGTTCACCGGCAATATTGTCATCTCCAAAGACGCCGCTCACGTC
CGGCACTTTAAGCTTTTCGTCCCCAATAACCGCACCCTGAACGTGGACATGGAGTGGCTG
TACGGCGCCAGCGAGAGCAGCAATATGGAGGTCGACATCGGTTACCTGCCGCAGATGGAA
ATCGAATCTTTAGGACCGTCCATCCCGTCCACGATCTACGACGAGAACGGGAATATCATG
GAAAGCCGGAATGCAGAAGGAGAGGCTATAGAGTTTGTGTTTGAAGATATAAACTGGCAG
TCGGAGATGACCTTTGAAGAAGCAGCCAGAAAACTCGAGGTCACCATGTACCCATTTAAA
AGGGTTTCTTATTACCCTTTTCCAGAAGCTTTTGACCGTGCATTGGCAGAGAAGAAACTC
GTGCATTCGGTTTTGCTCTGGGGGGCGCTGGACGACCAATCTTGCTGAGGTTCGGGGCGA
ACTCTCCGGGAGACCGTCCTAGAGAGTTTGCCCGTCCTTGCTTTGCTGAACGAGAGCTTC
ATTAGCACTTGGTCGTTAGTGAAGGAGCTCGAGGAGCTTCAGAGCAATAAAGACTCCTAC
GCAACGTTTGCTTCACTCCATTTGGAGAAGTACAACTTCCCGGTGGAGATGATGATCTGC
CTTCCCAACGGAACCGTGGTTCATCACATCAACGCAAATTACTTCCTGGACATCACCTCT
CTGAAGCCGGATGAAGTGGAGACCAACCTGTTTAGCTTCTCCGACGGCGTGGAGGATTTG
TCCACCGTCACTTACATCAAGTTCCTAAAGGAAGGGCTAGAGAAGGCCAAACCATTCTTG
CATTCTTAGATGATGGCACATTGAGTAGAAGCCCAGTTCTTGTTTATGAAGTGTTAATGA
GCTGTATTTTGTATAGGGCGTCCATTTTCTGTAGGACCCATCTTTTTTTGGAGACCCTAT
GTGTTGGGTTAACTTACATATAATGTTCATGTGGCTGTGGCTGAAATATCCTTATTAAAG
GTGAACTAAAACCCCAGAGAAATATTTGCAAAAGACCATAGCTTAGGTCTGCTATACTTC
TCTACAGGGGTTGGTCACCTTTGAGTTAACTTTTAGTATGATGTAGAGAATAATATTCTT
AGACAGTTTGCAATTGGTCTTTATTTTTTATTTATGGTTTCTTCAGCAACTTTTCAGTTT
GGAATTTGAGTGGTTATCTTGTTGCTAGGGTTCACATGACTTTAGCAACCAGGGAGTGGT
TTGAATGAGAGACTGGTATATGAATAAGAGAGGGACTGAAAAAGATAAGTAATAAAAAAT
AATAAAATTGTAGCTGCACAGAGCGATAGTTTGACTGCCGGGGTCAGTGACCCCCATTTG
AAAGCTGCAAGGAGTTTGAAGAAGGCAGATAATTCAGAAACTATAAATAATAAAAGCTAA
TTGAACAATTGCTCAGAATTGGACATTCTATAATATACTAAAATTAACTAAAGGGGTAGT
TCACCTTTTTATTTTTCTATTCAGGTCCTCTCCTGTTTAAATACCAGTCTCTCATTCAAG
CCACTTTCTGGTAGCTAAGGTAATTTGAAACCTAGCAACCAGATAACTGCTGAAACTCCA
AACTGGAGAGTTACTGAACAAAAAGTGAAATAACTAAAATGCACTATAAAAAAAAAAAAA
TGAAGACCGATTGCAATGTTCCATCCAACCATATATTGGCCAGAATTGGCGGGCCGCCAT
ACATACATGTATAGTCCCCACATATGCTTATATGTACGTGTAACCTATGCCTGGTCGTGT
TATCCACATGCAGTATTGCAGCTCTGTATATAAGATGCCTTTTTTGTATTTGGATTCTAT
ATTTTTATACCGAGGCGGAGGGGAAGGAAATACTTGCTCAGTCCCTGGGCCGGCTGTACA
GCATGAGGGTCTAATCTTTAAGTGTAAACGGGTCAGGCCTGAACTTTCTCGACAGTCGTG
CGTTTGGGATGAGAAGATCAGCTCACCCCCTGCTTTCTTTATTTAGTTTTTTTTCCCCAC
AATGGTATTGAACCACACTTAGCCTTGATGCTAGGTTACAGTATTAGGGCAAGGGCGCAC
GAAGCCCATTGGCTGCTTCTCTCTGCGGGCGGTTTTTATAGACGCGGATCTACCTTATCC
GCACACCCCTGTAGCTTCATTGACCGGCCCATGTCGGCCTGTGTGTACACAGAGCGGATA
TTGGCACAAAAATGAATATATTTGCGTTTTCTTTACTTTAGCCCCAAGCAGGCCAGCACT
GGGTCTGTGACTGGCGCTATAGAGGTGTGCAAAAAAGGGCCTCTGTATCTTTAAAAAAAC
GCCTGCGGTGAATCCGCTTAGTGTGCGCTTGTCCTTTAATGTTCCCTTTGGGGACACTGC
ACCATGTGGGTTTATAGAACCAGTAAGTAATGGCCTTAATTTGTAGCCTACTCACAGAGG
CCTCTTTATAAAGGCATCTGAAATATTTATGCTTTATAAAGCATGAATTGTATCCCAATC
ACAGAAATAATCACATTACAAGGCGATAAGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGTAATAATAAAACA
GTACCTGTACTTGATCCCAACTAAGATATAATTACCCCTTATTGGGGCAGAACAGCCCTA
TTGGGTTTATTTAATGGTTAAATGATTCCTTTTCTTTGTAATAATAAAACAGTACCTGTA
CTTGATCCCAACTAAGATATAATTACCCCTTATTGGGAGCAGAACAGCCCTATTGGGTTT
AATTAAAGTTTATAAGGTATGGAGATCCAAATTATGGAAAGACCCCTTATCTGGAATACC
CTTGGTCCCGAGCATTCTGGATAACGGGTCCTATACCTGTACTATTATAACGGTCATGGT
GACTTCTAATATCCATATTTTTTTATATAAATATATATAATACACAAGAGCCATAAATAG
CCTGGAAATTCTATCCTTATAATATACAGTTGGGCCATTTCCCTATAGGGCCAAAGTGTA
AATTATATCCTTATAAATGGTGCTTAGTGATGTCATTTCTGTCACATGACTCGCTAAAAC
TTCTATATTATAATAGAGTACCTCCTGGGATTAGAAGTCACCTCGGAGTTTTATCATTAC
TGTACTTTTACGGGATACAAATTCCAATCCAAAGTCTTACTGGTTCTTTAAACAGCACGG
TTACAATATTTACTGCACTGACGCGTTTTATAGGATGCGTTTTTTTGTTTGTAAGATGGT
TATTTTGATACTCTCTGCATGTTTACTGCATAATATTCACATTCGTTGGCCAAAGAGTTG
GACGGCCAAGGGAGCGGAGCGCCAGAACTTTTATTTTTTTTTTAAATATATGAATTATAT
TTGTATTTTTGTATCACGGCAGGAAGGATGCGTTATCTTCTATTTCCAGGGGTTCCCTAT
TCTCCATGAAGGTCTGATCTTAAAGTTACCCCCGATAATGGACCAGACCTGAGCCCACCG
AATAGCTA
Chart Advanced