SelenoDB
Release 2.0
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Transcript Report for SPT00003098_2.0
Identity
TranscriptSelenoprotein J (SelJ)
SpeciesXiphophorus couchianus (Monterrey platyfish)
Transcript IDSPT00003098
Transcript release2.0
External IDNone
Gene SPG00002976_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003098_2.0 # Transcript # Selenoprotein J (SelJ) # Monterrey platyfish (Xiphophorus couchianus) # Full length # Forward
ATGGCCTCGAGCGCGGCTGACAGAGCCATTGGCGCCATTATTGGGGCAGCTGTGGCAGAT
GCAGCAGGTGAGATACACACCACCTGTACAGATAACACTGCTCAGTCATACAGGTTACGT
TGCTGTTAAAAGCTCAACATATTTCAAACAGAATGCTGTTGCAATGTTGTTTCTGTTTAG
TCCAGTTGCGCAGATGCTTTATCCGTTAGAAACATCTGGACGTGCCGGTAGAGTTTAAGG
GAGGTGCCGTCGTTTCTGAGCCATGCTGATTACACCGAACAGCTACACTGATAAACAAAT
TCTAAACAAGTGCATTCGTTCTTGTCACCACGTGTTAGCCTTCAGAACACTATCAAATTG
AACAAAATGAACGGACGAACTCTGATTATGTACAGTTTGAATCAAAGATGGATTTTAGTC
GGCCCTTTCACTTAGAAACCCAACCTGGGCTCGGTCAGATTTGACGGAGTTCGACAGGGT
GCTCGGAAAATAAAAATAAAATGATGCAAATAAATTCAAAATTACAAGAATAAATTCATA
GCATTACCAGAATCAACTCGACATAACACGATAATAAAGTATAAACAAGAATAAAGTCAT
AATGTCACAACCAATCTTGTAATATTATGACTTCATTCTTGAAATATTTTTGACGTTATT
CTCATATTCATTCAACTTTTTTCTTGTAAAATTATTCTCATGTTATTACAAATTTATTCT
CGTAATATTATGACTTTATTCTGGCAATGCAATGACTTCATTGGAAGTCATTTTCCTTTA
TTATTATTATTATTATTATTATTATTATTAATATGGCCTTAATACTCAATCGTACTTGGA
GGTCATCTATGATTTTCATTTGTCATAATTCGACTGGGCCGATCTAACACATCTGAATGT
TGTTCTGTGGAAGATGAAGCTCCGCCCCACTTCTAAGTCTAAGCAAGTTTTCTCCCAGGA
TTCTTTTTCTTCTTCCTGTCTAACATCTCCATCTTGGTTAAGGAAAAATGCTTCTCTTTG
TTGTACCATGGCACAATTTCAGATTTTACTTGTGAAAAATAAAACGCTCCCTAAACTCCA
TTTCACAATTACAAACTACTTTGTGTGGGTCCATTAGGTACAATGTATTAAAGTCTAAAG
ATGTAGCTTGACAAAATGAAGAAGGTTAAGGGCTTTGAACGCCCTTATCTCCCGTTACAG
AGATACAGACCATTAACAGCAGGTAAAACACTTTAGGAAAGCAAAGGAGAGAGAGAGAAA
AAAGAAGATATTATAAAGATTTTCCATCTCTTCCCGTCCCTCCGGTTCTCCGTTTACCCC
TACAGCTCAGCCGATGCACTGGATCTACAACCCGGACCGGCTGAATGAAGTCCTCTCCGA
CCTGGAGCCCCGTCCCGAGTTTCGGCCTCTGTCAGCAAATCCTTTCTATCGCAGGACAAC
GGGCGAGCAGACCTGCTACGGAGACCAGGCGTACGTCCTGCTGGAGTCGCTGAGTCAGTG
CGGAGGTACTGGACTTCTCCCAAAGCAGGGCGGCGAGAAGTGTGACACGCACACGCGAGA
CACTTTTCAGAGCCCTGGCTCGACTGCTTGTTATCAAAATGGTTTGTTTTCACTTTTGCT
TGAAAGAAAACGTCACGTGAAAATAAACGGAATCAGAAAACCTTTTCCTAAAGACGTCAA
GCTGTTCTTTTATCAGTCAGCATGTTTTTTCTAAGCTTTACAGCTGGTCTTTCTTCTTAT
TTAATCACTTAATAATTACAGTTTCTGACTTTTTTTGATAGATGTCGATGTGAAAGACCT
GACTAGGCGCTTCTACGAGTTCTTTGGGCCGGGAACGTTGTACGATCTGCCCGTCAACGA
TCCTTACAGGAAAAAAGGAGGTACTTGGTGACTTTCCGTTTTACACCGATTTCCCTATGC
GTTAATGTCCAACTTTGTAGGCCGGAGGGGATGTGAGAGCCACTGTTACGATCTGTTAAA
ACCCTCTGTATGTTTTTGTCTTTTTTTTTTTTGCTGAAGGGACAGTCCCTGTCCGTATAA
ACGTGGCAGGAAGCACAACTTCCCTATTCTCGATTGCGCTCTCTGTTGCGCCGTAAATGT
TTGCTGCCTTGTTTTACTGCGAGGGTGACATGTAAGATTCAGTTCTGCAGTAACTTACCA
CAGCAGCAGAGTACGCCGCTGGGTCCAGTAAACGGCAGACAGCTGCATGTCTTGGAGTCA
TTGCGTCGTTATTTTTCGGAGGGAACTTTCGTCACGACCGAACGCCAAGCTTCACCTAGA
GAAACCTGAACTCTAGAAAGCATACGTTTTTTTCCATCTGGTGAAAATCTATACAGATAT
TTTACGATTTCTTCTGTTGTTTGACACTTCAAAACACACAAAAAGTTTCAGACATCCAAG
CAGTGTTTTATGCGAAACAAAGATAATCTGAATTTGAAAACTATACTAAAACAGTTTCTA
AGTGATGAATTCATTTAAATACCACCAGCCACATTAATGGGGCCTTACGGATAAATGATC
TATTGAACTGGACTTTGACTAAGGCATTGCAAAATCCTCACTTTTATTTTATTTTCTATT
GTTTTGTTTTTTTTGCTTTTATTCAGAGGTAGACACATTTTTATGCTTTGAATCATTGTC
CTGCTGCCTAATCCAATTAATTTAGTGCGTAAGGTTACTAATAACTCGAGGTCAGACGTT
GTCCTTCAGCATTTTTTGGCACAAAGTTTCATCAGTTACCACAAATCATCCATTTTTTTG
ACACAGCAGAGCAACGACAGGCTCTACAACCATGATGTAGATTTTAAACAAGTCTTACAC
CAGTTCTAATAACGTTTTGCGAAAACTAAAAATCCACTGGATTTTTGTCTCAATAATCCC
AAATATTCCCAAAGCAACAGAATTTCTTGTTGCCTGAAGTCAGCCTAGAAACTCTCCCAC
AAATGTAATTTTTACCCCTATTTCGTCCTTATTTTCTTATTTCTAATAATTGACACTGTC
CAAAGCTTAACACAAAGCGAGGCTTGTGGTTCTTGTGCAACTTCCTGGATAAGTTTATAC
GTTTTTTGTTGCATTCTTACGGTGGTTTCGATGGGCCAGCCACTACTGGCACGGTTCACC
GCTGTTCCATGTTTTCTCCATATGGAGAAAATGTGAAACACCACTGGGGTTTTGAGATCT
TTTAGCCTACCTCATGTTGTCAGACGGGTTCGGACTGGGTGAATTTCTTTATTCTACAAG
TCTGGCGGTAATCAGGCCTAGATTTGGGTTGTGAAATTGATACCCGAAAAGGGAGTTAAT
GACAATAAAATTCCTGATCTAACAAAGGGAGCAGTGATATTTTGACAAAGTGCTGGGCTG
GTTTCATAGGTTCTCTCCCGTACTAACTGAAACAATCACCATCAAAACTACAATCTGCAT
ATACCCTTGTGTAATATTAACATCTATCTGGTGATTTGACCGCCATGAAACCCTCTCATC
GTTTCACCGGTTAGGTCCCAAAGCCATTCTTCCCATTGACGGTCCGTGGAGGAACGCGAG
CCTGAAGGCTTTCTTAAGAAATGTTGACGCCGGAAAAGAAGAACCAGGTGATGAAAAAAT
GTAACCATAATCTCAAACGAACTGGCATCTGATATAAAATATATGAAGACTATAATCCCG
CCGTACTTTTTTTTTTTTCTTTAAGGCTGCGACGTGGACTGTCAGATTGACGGTGTCACC
AAACTCGCTCCGGTCGTCGCCATGTTCGCCGGGCGACCCGAGATGCTGGAGAAAGTGGAG
AGCGCCACGCGCGTCACCCAAAACAACGACATGTGCGTGGCAGTGACTCTGGCTGCTGCG
AGGTGAGGATGGGGATGCAGAGGGGAGCGACGATTTCGCCGGATTGCATCTTAGGCGCCA
GGGGCATCCTGAATCGTGGTGCGTTTGTGTGCGAATTCCAGATTTCTGGAACTTTTCGTT
CTGAAAGGCCCGGATCCCGACGCTTTGGATGCAGTTGTGGCTCAGCTGAGCAACCCCAAC
AGGAAGAACCCTCAGGATCTGGACAGGGCTGTCATTGGTGAATTGATCTGACGCCGTAAA
CTACAACTATCAAAGTGGGGCCCTGCTTTGTGAATGTAGCAGTCTTTAGGCCTATATGTG
TTAGTACTTAGGGGTTGCATTTACCGTGGTCATTAGAAATTGGGAAACTAAGAGTTGTAA
GGTGATCTTAAGAGGAGAGAGTAAACATGCAATCTTGGGTAAGAACCACATAATTACCAT
TATGTGAAATGAGCCACAACCTCAGTCCAATCAGTTTGCCTCTCAGATTTAATTTCACTG
AGCTAATGAAAAGCCCTGGAGCATCCATGATAGTTAAGCATAAGTTTTCCAATAAGAAAT
GCTGTACATGCTGATGTCTATCTTGAATTTGCACAGCGGAAACTAATTCCCCTTTAAACA
GGAGCAGTTAGAATAGAAGTATATGCAGACCATCTTTGAATAAACACCAAAGTTTGACTG
ATGAGATTCGAATGAACCACTGTATTTTGTTTCTCTTCTTCTCCTTCTTCTCTGTCTCGA
CTGAAGCGCATATCGGCCAGGTGAAGGAGAACTTAGCCAAAGCGTCCCATCAGCTCATAC
CCGCTGTGTTCACTAACACATGAGGTAAGCCAGTAGATGGCAGCGGGACTCAGGTCTGTT
GACTTGGCATGGCCTGCACGCCCTTCCTGAATGTAGATCCTGTCATTAGGCCCCCCTTTT
GCCTTTGATCTGTAATGCTCTCCCTCCTCCTCCGTTTTTTTTTATTTTTTATCCTGCCCT
CCCCTGCTGAGTTGGCTGTCTCGGGGTTTAAACAGCTTTTAAAGTTCCCCTCGCTAGATC
CGCTCACGTCCCTGCTAATGGCGTCTGAAGAGCGGAGCAAATGACGGTGCTTTTGCGGAT
AATTGGAAACATGCCTGCGGTCGTCTGTGTCCAGCTTTGCCCGGCGCGTTCCAGGCGGCG
CTGCACGGGGTCCTGACCATGAAACAGCTGGAGGAGGCTGTGAGGGACACCATACGCCGA
GGGGGATGCACCGCCAGCCGGGCCTCCTTCATCGGAGCCTGCTTCGGGGCGCAGGTACAG
TAGGAATGTCAGGCAATGATCTGAACTCATACTGGTGTGGGAAAAAGATTGTGCATAGTT
TTTTTTTTATTAAATATCTGCAGATGTAATGCATTTCAATGTAGAGGTACGCTTTCACAA
AATGGTCATTATTACATATATGATTAAAAGCTGAAAGAGACAATAATAACAAATGCTAAT
GTGTGGCACTTTGATCGGAACTGCGCCTCCAAGCAAGGATTGTGAGAGAAGGTTATGGAA
CTCACGCCCCACTGTTAAAACATGGCGGAGGACGTGTAATGCTGTGGTTCTGTTACTCTA
CCAAAGGAGTTTTGGGAGTGCAGCTCTTCAGATCAGAACGCCACCAAACCAGCGCAAAAC
GTTTCATCACACGCATCAAACTTCTTCCATGGTCGCCTCAGTCCCTAGAGCAATGGTTCC
CTTTGTGACCAATAAAGTAGTTTTGAATTAAATTGAACTGGACTATTGTGGCAAAATTTG
CGAGAGTAAATTGGATCGCGAAGTGCGTGCGGGAGCGGAGACGCTCACCGTTCCGTTTTT
TTTTTTTGGCAGAGGTAGTCGACTTCCTATCGTTACACCTGATTGGCTGCGGTCCATTTC
CTCTGTGATTAAACGGGGCCGCGGTTCAATCAATAATTGTATCAAAAAATTCCTCTCAAT
GTTTCAACCTTCTGAAATGGTGTAGAGAGCACAACTCATTCATATCGAAGGTACCAGAAA
GTGTGATGCTGGCAATTTTGTTGAACAAAATTACCTGTGAACCAAGCAATTACCTACAAA
TTAAAGGTTGTATTTTTGTGAAATTGTCAGTCAGACGCACTAAAAGTAGAATGTTTTTGC
AGGTCTTGATGAGAAACGATGCATGGAAACATTGTGCATACATCCTCCTCGTCTATATTT
GTGAAACACTCCTTAGCTTTGACAGCGCGCTCGTCCATTCCAAGAGTTCTTCTGCATTAA
TCTGTCCTCTCGACGTTATTTGCAAACCGGTCTCCGCGGAATCCCGGAGTCATGGAGGAA
GAGGACGCTCAGATACCCTCTGCTGTTGGAGCTGGCTGAAAATGTGGTCGGCAAACGGCA
GCAGTTGTAGCTTTAGCATAACATCTATTATTGATCAATTGAGTGTAGGCCTCCCCATGA
TGCAGATGCACTTTGACATGGCAGTTCATGACGGCTGCATTCTAAAGTCTGAGTGTAGCT
TGAAAATATTTGCTCTGTC
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