SelenoDB
Release 2.0
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Transcript Report for SPT00003115_2.0
Identity
TranscriptGlutathione peroxidase (GPx)
SpeciesNeotoma lepida (Desert woodrat)
Transcript IDSPT00003115
Transcript release2.0
External IDNone
Gene SPG00002993_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003115_2.0 # Transcript # Glutathione peroxidase (GPx) # Desert woodrat (Neotoma lepida) # Full length # Forward
AGCAGCTGGAAGGCAGAGGATGAATCGATCCCCTGGGGCTGGGAGGGAGCTGTGTGGAGA
TAAGACACNTGTGTAAACGGAGGCCAAGTCTTTCTGTCCTGTCCTCTTGGTCCCAAATAC
CAAGCAGTTGCTTCCCAAATTACCACACAGACGTTTATATTAATTATAAATGCTTGGCCG
ATGGCTCAGGCTTATTACTAACTAGCTCTTAGATTTAGATTAACCCATTTTTATTAATCT
GTGTTTTGCCCCATGGTTGTGGCTTTACCAGCCCTCCAGCATCCTGTTTCTTGGGCAGCT
TGCGGTGTCTCTCCCCATCTCTGCCCTTCTTCATCTCAGTCCTCAGTTTGATTGTACTGC
CAAACCTTATCTTGCCTTGCCATAGGTCAAAACAGCCTTATTATCAACCAATGAGAGAAA
CACATATTCACAGTGTACAGAAGCACAGGTCCCACAGCACACATGTGATCAGCCAGTGTT
AAAGCCTGGAGTGGTGTGAGAAGAGCAGAANCCTCCTCAGAGGTTGACAGCCTTCTAAAG
ACAAAAGCTATTTGTGCCGCACACCAATAGTGTCATAGAAGAATCACTCCTCTTGTGTGT
GCATCTTTGTACCCCTGGAGTGGCTGCACAAAGTGAGGCAGCTGCATGGTGTGACCAGTC
TGGGAGAGAGACGTTAGAAGTCCTCCAACCCCAAAGTGTGGCCCAGGAGAAGCCCAAAGT
CCCTAATCGTCCCTAGGAATGCAGAGGCAGGTGTGAGTTAAGAGCCGGAACCTGTCAAGA
GCTCTAGCCTGGAGGAGGATGGAGAGTGAGTAGGACCTCAAATGGCTCAGTGTGCAGAAC
TAACACAGGACACAGGAGCCATGTGAACCCCTGACACCCCCAGCCCCTAACTGTGGGTAC
CAGTAGACCAGGTGTGAGAGGGACACCTCATGGATGCCATTGAGGTCTGCAGGAAGAACA
TTGCGGGGGGGCAGCACCCAAACCTTTCATCACCTCCACTGCCCAGAGTTAAACCCAGGA
AGGGCAAGCCGAAAGGAAAGACAGAGAAGAGGTAATCCAGGCAGAGGTTTATTTATCTGT
CCAGAAAAGCAGGACTCTTGAACCAATTCACAGTAGAAGAGACTGGATCTCTTTAATTGC
TAAGCTTAAACTCTCCCAGTAAAGACCCGGTGTGTTAGGACACACCCTCACTTCCAGCAT
TTAGGAGATGAAAACAGGAAGATTAGAAGTTCAAGGACACCCTCAGCTATGTAGTGAGGT
GGAGGCTGGGTCTGGACTACATATGACCTCGTCTCAAAAAACTAACACGTAGCCGGGCGA
TGGTGGCACACGCCTTTGATCCCAGCACTCAGGAGGCAGAGGTAGGTGGATTTCTGTGAG
TTCGAGGCCAGCCTAGCTTACAAAGTGAGTTCTAGGACAGCCAGGATTGTTATACACCTG
CCCCCACAAAACAACAACAACAAAGAAAAAATGTACAAAACAACAAAGGTGTGTATTAAT
ATGATAAAATATTAGTTAAGATATTAAATTAAACAGATATCTTTCCCACTTACTACTGAT
GCAAAGGCACACGTATGAAGTTTGCATCCATTCTAGAAACTAAAGAGCTCTCCCTCTTCA
GAATCAGCTTAGTCCCGGCATGTGATGTTCGGCAACTCCTGCAGCTTTACTTTGAGTCGA
GTTTATGAGTTATAATTTACACACAGTAAAACCCTTTCAACGTGCGTACTTGAATGTGTT
TGGACAGGTGTGCGCACTTGAATCACCTTCACCCCAATTAACATCTGAAATAGTTCCATC
ATCCAAAAGGCACCCCTTTTAGGTGGTTGGGATCCCCACAGCCACCCAATCCGGAGGCCA
TTGATCTGATTTCTGACTCGGTCGTTTGCTTTTTCCAGGATGTGATGATGGACATGAAAT
CAGAGATTATGGAGCTCTTTATGCTAAATGTTTATAAACACACTTCCTTAACTACCTCAG
CTTCCTCCTCTTTTTCCACTCAGTCTTCTCTGCCAATTGCTTTATATGGACAAGTCCTGG
ATCGGGGCAGCCTCCCCCGAGCCCTGCCTAGACCTATTTGTGTGATGACAGTCCCCAGGG
TCAGAGTAGGTATAGAACTGTGGAGTTAGCGTTCAATGTCGCCAGTTCTCTACATTTACT
CCTCTCTCTCTCTCTCTTTTCTTCTTCCTCCTTCTTTTCCTCCTTCTGCTTCCTGAGACA
GGGCGGCATATAGGCCAAGCTGGCCTTCATCTTATTATATAGCAGAAGATGACCTTGAAC
TTCTGATCCCCCAAGCTTCCACTCCTGAGTGCTGGTATTTCAGTCACATCCATCACACCC
AGTTTTATGGGGTGCTGGGAGATCCAGCTCAGGGCTTTTTGCATGCAACTAAGATACATG
TGTAGCCCACATTTTCTTTTCTTCTGGAGGTATTTCCCTTCACCTCAGGGAACACTAACA
TTCTGCCTTCAGATCACTCCTGACACATGCTCACTTCTCCCCTACTTCACCTGTCCCAGC
AGCCTAGTGCCTAAGGAATCCAGTCCATGCACACCACCTACTCCCACCGAGCTTCAAGCA
TGCCCTCTCTTTTGCACANGTGTTCCTCTCCTCACCCTTTACCGTCTGTCATCTTGGTAT
CTGTGCCCTGAAACATCTTGAGTTTGTTTTTGTTTTTTTCTCAGACAGGGTTTCTCTGTG
TAGCCCTGGCTGTCCTGGAACTCACTCTATAGANTAGGCTGGCCTCAAACTCAAGAGATC
TGCCTGTCTCTGCCTCCTAATTGCTGGGATTATAGGCATGTACCACCTCCACCTGGCTAT
ATCTTGAGATATCTTATTGGCCGAAGATCTCTCAGCCTCCAGCAGCATTTGGTCAATTGG
TTTGGGGTATGTTGTTGGTTGAGTTTTTTCTCTCCTTGGTGAGGAAGAAGCAAGAAGCCC
CACCACTGGGATTTCGTTCCTGACAGATTCCGCATCTTCAAGACAAGGACTGGGTCTCAC
ACGCAGTGAGTGTTGCCTCCACAATGGTAAAGAAATAAAGAGGAGAGATAAGACAAGAGG
GAACAGAGTTTGTGCTTAGGGATAAGGCAGTTTGACTAATGAGGAGCTCGAGGGTATCTG
CCGCACTACCCATGTTAAACATTTGCAACTGGCTGTCCAACAGGAGCTACACNGCCCTTC
TCCATCTACCATCTACCGTAGGCGTTTCAAAGGGCCTCGCTCCCGGAACAGGTCTCCTTG
GGTTTCTAGGAGAGGAAGGCAGAGGCTCAAGGGAGGGAGAGTAGCAGAGGGCAGAGGATA
TAACTTAGGGATACTGGCTCCCTCGATGATAACTTTTTCTCAGGGCTATTGACTTCTTGA
CAGAGAGACCTTAGGCCAGTGGTTCTCAACCTCCCTAAGTCTGTGACCCTTTAATACAGT
TCCTCATGTTGTGCTGACCCCAACCATAAAATTATTTTCATTGCTACTTTGTAACTGTAA
TTTTGCTACTGTTATGAATCACAATGTAAATAGCTGATGTGCAGATGGTCTTAGGTGACC
TCTGAGAAAGGGTTGTTCAACCTACAAAGGTGTTGTGACCCACAGGTTGAGAACNGCTGC
CATAGGCTATTTAGGCTATGTTCAATCTTTCTCT
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