SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00003115_2.0
Identity
TranscriptGlutathione peroxidase (GPx)
SpeciesNeotoma lepida (Desert woodrat)
Transcript IDSPT00003115
Transcript release2.0
External IDNone
Gene SPG00002993_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003115_2.0 # Transcript # Glutathione peroxidase (GPx) # Desert woodrat (Neotoma lepida) # Full length # Reverse
AGAGAAAGATTGAACATAGCCTAAATAGCCTATGGCAGCNGTTCTCAACCTGTGGGTCAC
AACACCTTTGTAGGTTGAACAACCCTTTCTCAGAGGTCACCTAAGACCATCTGCACATCA
GCTATTTACATTGTGATTCATAACAGTAGCAAAATTACAGTTACAAAGTAGCAATGAAAA
TAATTTTATGGTTGGGGTCAGCACAACATGAGGAACTGTATTAAAGGGTCACAGACTTAG
GGAGGTTGAGAACCACTGGCCTAAGGTCTCTCTGTCAAGAAGTCAATAGCCCTGAGAAAA
AGTTATCATCGAGGGAGCCAGTATCCCTAAGTTATATCCTCTGCCCTCTGCTACTCTCCC
TCCCTTGAGCCTCTGCCTTCCTCTCCTAGAAACCCAAGGAGACCTGTTCCGGGAGCGAGG
CCCTTTGAAACGCCTACGGTAGATGGTAGATGGAGAAGGGCNGTGTAGCTCCTGTTGGAC
AGCCAGTTGCAAATGTTTAACATGGGTAGTGCGGCAGATACCCTCGAGCTCCTCATTAGT
CAAACTGCCTTATCCCTAAGCACAAACTCTGTTCCCTCTTGTCTTATCTCTCCTCTTTAT
TTCTTTACCATTGTGGAGGCAACACTCACTGCGTGTGAGACCCAGTCCTTGTCTTGAAGA
TGCGGAATCTGTCAGGAACGAAATCCCAGTGGTGGGGCTTCTTGCTTCTTCCTCACCAAG
GAGAGAAAAAACTCAACCAACAACATACCCCAAACCAATTGACCAAATGCTGCTGGAGGC
TGAGAGATCTTCGGCCAATAAGATATCTCAAGATATAGCCAGGTGGAGGTGGTACATGCC
TATAATCCCAGCAATTAGGAGGCAGAGACAGGCAGATCTCTTGAGTTTGAGGCCAGCCTA
NTCTATAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTGAGAAAAA
AACAAAAACAAACTCAAGATGTTTCAGGGCACAGATACCAAGATGACAGACGGTAAAGGG
TGAGGAGAGGAACACNTGTGCAAAAGAGAGGGCATGCTTGAAGCTCGGTGGGAGTAGGTG
GTGTGCATGGACTGGATTCCTTAGGCACTAGGCTGCTGGGACAGGTGAAGTAGGGGAGAA
GTGAGCATGTGTCAGGAGTGATCTGAAGGCAGAATGTTAGTGTTCCCTGAGGTGAAGGGA
AATACCTCCAGAAGAAAAGAAAATGTGGGCTACACATGTATCTTAGTTGCATGCAAAAAG
CCCTGAGCTGGATCTCCCAGCACCCCATAAAACTGGGTGTGATGGATGTGACTGAAATAC
CAGCACTCAGGAGTGGAAGCTTGGGGGATCAGAAGTTCAAGGTCATCTTCTGCTATATAA
TAAGATGAAGGCCAGCTTGGCCTATATGCCGCCCTGTCTCAGGAAGCAGAAGGAGGAAAA
GAAGGAGGAAGAAGAAAAGAGAGAGAGAGAGAGGAGTAAATGTAGAGAACTGGCGACATT
GAACGCTAACTCCACAGTTCTATACCTACTCTGACCCTGGGGACTGTCATCACACAAATA
GGTCTAGGCAGGGCTCGGGGGAGGCTGCCCCGATCCAGGACTTGTCCATATAAAGCAATT
GGCAGAGAAGACTGAGTGGAAAAAGAGGAGGAAGCTGAGGTAGTTAAGGAAGTGTGTTTA
TAAACATTTAGCATAAAGAGCTCCATAATCTCTGATTTCATGTCCATCATCACATCCTGG
AAAAAGCAAACGACCGAGTCAGAAATCAGATCAATGGCCTCCGGATTGGGTGGCTGTGGG
GATCCCAACCACCTAAAAGGGGTGCCTTTTGGATGATGGAACTATTTCAGATGTTAATTG
GGGTGAAGGTGATTCAAGTGCGCACACCTGTCCAAACACATTCAAGTACGCACGTTGAAA
GGGTTTTACTGTGTGTAAATTATAACTCATAAACTCGACTCAAAGTAAAGCTGCAGGAGT
TGCCGAACATCACATGCCGGGACTAAGCTGATTCTGAAGAGGGAGAGCTCTTTAGTTTCT
AGAATGGATGCAAACTTCATACGTGTGCCTTTGCATCAGTAGTAAGTGGGAAAGATATCT
GTTTAATTTAATATCTTAACTAATATTTTATCATATTAATACACACCTTTGTTGTTTTGT
ACATTTTTTCTTTGTTGTTGTTGTTTTGTGGGGGCAGGTGTATAACAATCCTGGCTGTCC
TAGAACTCACTTTGTAAGCTAGGCTGGCCTCGAACTCACAGAAATCCACCTACCTCTGCC
TCCTGAGTGCTGGGATCAAAGGCGTGTGCCACCATCGCCCGGCTACGTGTTAGTTTTTTG
AGACGAGGTCATATGTAGTCCAGACCCAGCCTCCACCTCACTACATAGCTGAGGGTGTCC
TTGAACTTCTAATCTTCCTGTTTTCATCTCCTAAATGCTGGAAGTGAGGGTGTGTCCTAA
CACACCGGGTCTTTACTGGGAGAGTTTAAGCTTAGCAATTAAAGAGATCCAGTCTCTTCT
ACTGTGAATTGGTTCAAGAGTCCTGCTTTTCTGGACAGATAAATAAACCTCTGCCTGGAT
TACCTCTTCTCTGTCTTTCCTTTCGGCTTGCCCTTCCTGGGTTTAACTCTGGGCAGTGGA
GGTGATGAAAGGTTTGGGTGCTGCCCCCCCGCAATGTTCTTCCTGCAGACCTCAATGGCA
TCCATGAGGTGTCCCTCTCACACCTGGTCTACTGGTACCCACAGTTAGGGGCTGGGGGTG
TCAGGGGTTCACATGGCTCCTGTGTCCTGTGTTAGTTCTGCACACTGAGCCATTTGAGGT
CCTACTCACTCTCCATCCTCCTCCAGGCTAGAGCTCTTGACAGGTTCCGGCTCTTAACTC
ACACCTGCCTCTGCATTCCTAGGGACGATTAGGGACTTTGGGCTTCTCCTGGGCCACACT
TTGGGGTTGGAGGACTTCTAACGTCTCTCTCCCAGACTGGTCACACCATGCAGCTGCCTC
ACTTTGTGCAGCCACTCCAGGGGTACAAAGATGCACACACAAGAGGAGTGATTCTTCTAT
GACACTATTGGTGTGCGGCACAAATAGCTTTTGTCTTTAGAAGGCTGTCAACCTCTGAGG
AGGNTTCTGCTCTTCTCACACCACTCCAGGCTTTAACACTGGCTGATCACATGTGTGCTG
TGGGACCTGTGCTTCTGTACACTGTGAATATGTGTTTCTCTCATTGGTTGATAATAAGGC
TGTTTTGACCTATGGCAAGGCAAGATAAGGTTTGGCAGTACAATCAAACTGAGGACTGAG
ATGAAGAAGGGCAGAGATGGGGAGAGACACCGCAAGCTGCCCAAGAAACAGGATGCTGGA
GGGCTGGTAAAGCCACAACCATGGGGCAAAACACAGATTAATAAAAATGGGTTAATCTAA
ATCTAAGAGCTAGTTAGTAATAAGCCTGAGCCATCGGCCAAGCATTTATAATTAATATAA
ACGTCTGTGTGGTAATTTGGGAAGCAACTGCTTGGTATTTGGGACCAAGAGGACAGGACA
GAAAGACTTGGCCTCCGTTTACACANGTGTCTTATCTCCACACAGCTCCCTCCCAGCCCC
AGGGGATCGATTCATCCTCTGCCTTCCAGCTGCT
Chart Advanced