SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00003117_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesNeotoma lepida (Desert woodrat)
Transcript IDSPT00003117
Transcript release2.0
External IDNone
Gene SPG00002995_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003117_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Desert woodrat (Neotoma lepida) # Full length # Forward
CAGAGTGGCCTGCTAGGGGAAGCAGATCCTCTGGTATGTCCTGGAGACCTCAGTGGGCCA
TGCTGGGTACTCTCTGGGAGCTATTTTTCAAGGTTCATTTGGACATGTGGATCTGCCCTT
GGGCAGTATGGCCAGAGTCACTCACCTAGAGAGAAAAAGATGTAGGCTGGAGAACAAAGG
GTGTTCTGAGACCTTGGCCATGGGTTTTAAAGGAGCAAGTCTTTGCTGGCTTTGGGCATA
TCCCAGGAGACCAAAGTCCAGGCTGGGGAGCCCCACTGTTGATTCTTTCCCTGCAGGGCC
AGGCAGGCCTCCTCAGTGCCAAGATGAGCGTCACATCATGGTTCCTGGTGAGCAGCAGTG
GTACCCGCCACCGGCTCCCGCGTGAGCTCATCTTCGTGGGGCGTGATGAATGTGAGCTCA
TGTTGCAGGTGAGTGGGGACTTCTTCCATTTGGGAAGGTGGTTCAGGGACATCAAATCCA
GGAAGAGATTACCTGGGCCCTAGACCCACAGGTGGGCATGAGCAGGGGTGTGAGTGATTG
TTCACAGACCTGGGCTTTTGCTCCTTCGTGTCAGACCTATTTCTGACAAGAAAGTGATTA
GTGCCAGGGCTCCGGGAAGGGTGAGAGGGTATCCTGTGCTGACAGATCTGAGGGAGCATC
TTAGAAGGTGCTGGAGGTGGGTCATTCGTGTCCTTATTGCTTTGCCATAGGGGTAGCCTG
AGGGCTGGACCTGGAGGTCTTGTTCCTAAATGTGTCCAGATGGTGGATAGTGCTGGTGAC
TTTTTCATGTGCTCTGACAGGATGGGTCCCCTCCCTGGGCTATAAAGGGTGATATGGCTG
GGCCACCTGGGTTTCAGAGCCTGAGTTGGGTTTCTTGGGGCTTGTGCATCTAGCTTGAGA
ACAAAGGGTGGGATGGTGTGTGGACCTGCAAGGTCCATCCTGGCTTGGGGGTACAGTGGA
CTCCCTGCAGTTCTGAACTACTGCTACCCCAGCATAGAGCATGGAGTCCTAGCCTCAAGC
CTCTGGGCTCCATGTCCTGTCACGGAACCCTGAGAAGGAAATGAATGTCCTGATGGACTC
ATCTGGTCCAGCTAAAGGGTCTGCTTAGGTACAGAGCAGCTGCCTAGTGCCCCTGGGAGT
GTTGACACCTAGATGTGTCTTGTACTTAAGTTCCCATGTACAGTATGGCCACCCCGCACA
CTCCTAGGGTATGTGAGGTTCCCAAGAGGGGGCTGAGCTTGAACTGAGCACAGACAGCTG
GACAACAAGTCTTGATGCACCTGTCCAAAGCTAGCACAACCCAGCACCTTTGCTGCTTTC
TGAGAGTTTATGTTGGATCTGGTCCCTAGTGGTATGATATTAAGAGGTGGGGACATAAGG
GTCCTTATGCATGGGATTAAGGTCTGTCTTGGGTTTCTATTGTTGTGATAAAAAACTACC
AAAAGCAACTTGGGGAGGACAGGATTTCACCTTATAGCTTATACTCTATCATGAAAAGAA
GTAACCCAGAGGCAGAAACTGACTGAA
Chart Advanced