SelenoDB
Release 2.0
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Transcript Report for SPT00003123_2.0
Identity
TranscriptSelenophosphate synthetase (SPS)
SpeciesNeotoma lepida (Desert woodrat)
Transcript IDSPT00003123
Transcript release2.0
External IDNone
Gene SPG00003001_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003123_2.0 # Transcript # Selenophosphate synthetase (SPS) # Desert woodrat (Neotoma lepida) # Full length # Forward
GCCCATCATGGCTGCATATGGCCATAATACATCTTGCCCAATGCTCTCCCACTTCAAGGT
TCATCATGACTGCCCATGGTCATGAGCCTATCAGCCTCTAGTAAAGTTCTTGTGGATGGT
AATTCATCACAATTTCCTTCCTACAAGGCTCTTCTAACAGTTTATATACTATCTTGCATG
ATGCTGAAGTCTATCTAACCATGATGATAGCTGGTCTTCACTGCTTATATCTCCATGACT
GAATCCCATACAATGGAACAATGATCAGGACATTGGACTTCAGCAATGATCTCTTAATTA
AGATCCAATTTCTCTCATTTCCATAATATCCTTCATATGTGTGACTTGACAGCACAGAGA
CTATTGTATCATTGTATCAAGGGACACAGTGGCCCACCAGGCACCAGGTACATGGNGGGT
ATGTCATTCTGTTCAAGGAGGAAAGAAAAGTACACAAAAAGAAATCACTCAGGCAGGGCA
GTGGTGACGCATGCCTTTAATCCCAGCACTTGGAAAGCAGAGGCAGGTGGGTCTCTATGA
GTTCCAGGCCAGCCTGGTCTACAGAGTGAGTTCCGTGACAGGCTCCAAAGCTGTCCCGGA
ACTCAAAACTTGTCTCAAAAAAACAAGACAGAAAAAAAAAAGAAAGAAAGAAAGAAATCA
CTCAGCTTTTAGTACAGGAAACAGAAACTTAGCGTCTTTAGGAACAGTAACAAACATATG
CAAATCACAAATCATTTTAGTATATATGGCTCCATATATATGCTGGTTAGTTTTGTCAGC
TTGACACAAACTGAGTCACTTAGGAAGAGTGAACCTCAACTGAGGAATTGCCTTTATCAG
ATTGGCCTGTGGGCATGTCTTCAGGGCATTTTCATGATTGATGATTCATGTGGAAGTGTC
CAGCCCACTGTGGGTTACAACCCCTAATCAGGTGGTCCTGGTTTATATAAGAAGACAGGA
TGAGCAGTCACAGGGAACAAGCCAGTAAGCCGCGTCCTCCAAGGCCTCTGCACCAGGCCC
TGCCTCCCGGTTCCTGCTTGAGTTCTTACCCTGACTTCCCTCAGTGATGTCNCTGGGATC
GGGACATATAAGCCAAATAGACCTTTTACCTTCCCAAATTGTGTCTGGTCATGGTGCTCA
CCACAGCAATAGGAGATGGACTGGGANNATATAGTTACAAATCTGTTTGTATATACAGNC
ACTCTTGGCACCTGAGAGTGGTTGGTCCCAGGACCCCCACAGATACCCGAGTCTTTGGTG
TTCAAGTTACATGGAATGCTCTATCTTCTTAACTCCAACACTCATAATATCCAATACAAT
TCAATTCTGTGGAAATAAGTTGTACTATGTTGTTCAGGGAACAAGGACAAGGACAAAAGC
CTAGTCAANTTTAGTATAGATATAATTATTTCTGAATTATGTTCTCTCCATAGTCGGTGG
AATTCTTGAATATGACACCCAAAGATACAGAAGGAAAACTATTAGTATTTTTGTAGCTTT
NGATAAGTAAATGTTGTTCTACATACGGTGTTGTAGCATGAAATTGTTTAAATTATTCTG
ATCTCAGGAAAGCCATCTTTTNGATGCTCCGCGGTGNTGCTATGGAAAAAGTCATTTTTG
GTAATAGGCAATTTTAAATCCAGAAGCTTCCTAAGACNGCTTTGTGAAAGAATCATTTCT
TTAGTCATGACATTTATGTAAATGGCCACAAAAACNTTTTGTAAAAACTGTTTTTCTCCT
CCATAGCTGATGGCCNATAATTTTCCAGAGAACAAGTGTAAATCCCATGGCGTCTCTAAG
TTGTTAGCGTTCAGTCTCCATTGTCTGAGATAGAGGTGAAAAGGTCAAGCTCCCAACAAC
TGAAAATCCCTTCAAAGTGCAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNN
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