SelenoDB
Release 2.0
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Transcript Report for SPT00003124_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003124
Transcript release2.0
External IDNone
Gene SPG00003002_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003124_2.0 # Transcript # Selenoprotein M (SelM) # Channel catfish (Ictalurus punctatus) # Full length # Reverse
CAGTAAGAACGTAGATCATCAGCCCTAAACCAATCAACAGAATGATTTTTACAGTTTGGG
GCATCATTCAGTTCTCATCTGGGCCGAAACTGGACTCCATGACAACTCACTGCGATCAGC
TGTGTGTGTATATACACATATATAATATACACACACCAGTACTGTAAAAGCAGAGCACAA
ATTATTTTTCATAGACATGTTTACATATAAAAAAGGCTATAAATCTTTGTGGGGAGACTC
GTTCTCAGGCTGGGGCTCCTGTGCTAGGTCGCTGTTTGCGGGTGCTCTTCTAGTGTGGTG
CTCTTTGAAGGGGCTGTCTTTAGCTGGCGAGAAGCGAAACTCCTCCGGCACGTCATCTTC
GGCTCGTGCTTTTTTATAGAAGCCCAACTCCTCCAGAAGACCATTGATGTCGGTACGGGT
CATGTGGGACAGCGGGATGCGCTACGATGGAAAAGCAAGAGCGTGAAGAAGATCGTCAGG
TCAGGATAAAGAACACATACTTCCTGCAAATCTTCCCAGGGTATAGATGGGGTTTTTTTG
TAAAAAAAAACAAAACATCCGGGTTGTACTAGGGAATTCCTGGAGTAATGGAAAACCGCA
TGGTTCAGGATACTTTTTAATCCCGAGCGAGCTGAGGTCAGAATAGAAGAGCAAGCGCTA
CAACAGGGTCTAGCTAAAGACATTACATTTATTTTAGGGAGAATCCTGTAGAACGAATGT
TGAAATGGAGATCTGGTAAGGGTGTAAAGATAGACTCCGGTCACGATTCGATTCAGTTCC
GTTCCGTTCTCAGAAAACTGATGACTGAAAAGACTACTTATTAAATTTCTGTACAATAAA
CACCACTAAAACTGCATGAACTATAACAAGAAGAAGAAGAGGTTTAATGTTGTAAACCAG
CTGTACTGCAAGTTCACCGTATCTTAAATAAATAAATTGAAACATTCACACACGTTTTTT
TGACCCCGGGGACTGAAAACAAAATCAACATAAACAGTGAGCTGTGTAGCAGAAACAGAG
CTCCAAAGTCGGCTAAAACGCGCGGTTTCCGCAGCCTCTCTCAGGCACTATAGGCATGGG
GATGGCGTTGTTTGAAAGCTGCTGAAGACCTTTATTTTTAAACCATTATACCATGGTCAT
GCAACCATACAGCATACTATACACGTTGCTTTGCACTCCGAAGCCATTGGGCTTTCGGGC
ATTTCACAAGTGCAGATGATTCCCGCTTTGGTAATGAGAGAATGCAAAAAACACACAAGC
CCAGTGTGCTCTCCATATATTTGAACTCTGTGGTTTGCACAGTTTGGGACATCTGATGTT
CTGCATTATATGCATAATTAACAGATTTCCAATGGGCATCTTCGCATTTTTGCGTCACGA
TGTATCGATCATTACACCCCTAAGGTCTGGCATTCAGGTTTAAAAATCCAGATCTTGGGA
TTTAAATTATTTTATTATTTTATTTATTTATTTATTTTTTAACGATGGGCTGGGATGTTA
AACCGTTCCCATACTCATTTGATAAAATCCTTTAAAATCAGAACACTGGACACGTTGTAG
TCTGTTACTTCAAACACTACCGTGCAATAGGGGTTGTACTGGAAGCACCAGCTGTCATAT
ACAAGTCTTGGGAAACGATTCCCTAAAATGAGAAGGGAACTGAAGTACTTTGGCAGGAAG
ACCCACACAGTGTTCCAGCATCACTGGAAAAGAACTGAAGATTTTTGGTGTCTGTTGAAA
CTTGTCTAGCAGGTGGTGCCAATAAGGACCTGCGGTCAAGAAAATGCGTCTCTGCATTCA
AATTTTCAACATGACCTTGTCCTCTTCTCACCATTTTCCCTTGATGGGATATCGGTTAAC
ATTTTAAAGAGGGCTCCATTACTTAAATGAGCCACAGTCAAGATAGTTCGTTCAGCCTGG
GTGTAGACTCCAGGAAATTGTCTCGAAGACATCTGATCTGGTGCAATTTCCTTTTTAAAA
ACAGCTGAAAAAGCAATAGAAACCCGATTACTGGCACGCTGAAACTGCTGCAAGTTCAGA
CCCAACCCCCACCCCTCAAGTGAGGCCACGTGTGTCGAGGGTACAGATCATTATTAATGC
AAATAATAACCGCTGCACTTGTTGGTCAAATACGAAGGTAAAGATGAATACAGACTAACT
TACAGACAGACCTTCAGACGGCGTAATTAACGGCTTCATGACCTAAAGGAAGTTTCGAAT
TCTGCCTAGGACGAAGAAAACATGCTCATAGCATTCTTAACACTGCTGTGGTTTGTTAGC
TCCTGAGGGACCTTCACACTAAGATTATAGATAAACTTTACACTACAGACTATAGTACAT
ACTTTTCTGCATTTATAGTTACAGAACTGAGAAACAAGTCAGTCATCACTCGTGGACGCT
GGAGACTCCTTCCAGAAATGTTAAACAGACGTCTCGGAGCTTGATTAGAGCAAGGATTAT
ACATTATTCTTTGGTTATCTGGTTGTTATTATTAGCTTTCGTTCATGTGAATCGTCCATC
GTATGACTCACCCTGTGAGTTAGACATTACTATAAAAACAATTATGTTTGTACTTACATC
CAGCTCCTCATAGTAATGGTTCAGGAGGACGAGCTCAGGGTCTGCACCAGGGATGTGTTT
CATCACCAAGTTATGACTGAGAAAAATGTGAAATCAAGGACAATACACCCTGAACAACGT
AAGCAGGAAATGAATTCAAGAGTGGTGGTGGTGGGGGCAGGGGGTGTACTACTGTGTACT
GCTACCACCACCACTACTTCTACTACTGTTGCAGCTGCTACTGCACTATTGATCTTAAAT
GATTACGATTCGATCATGGAAAATAAAAATATTTCACACACGTCCATGTGGTTTTCCTCT
GGATTCCCCAGTTTCCTCCACCTCCCAAAAAAAAAAACATGCCAGTACGCAGATCGGCTA
CACTGAAGAGCCGGCTCTGAATCCACCACTGAAAATGGCTGAATGAATAATAATAATAAT
AATAATAATAAACAATAATTCTGAACATAAACAGGATTAAACTTCAATCAATTAATCTCA
TTATAAACTGGATGAAGGATACTAGAGAGGGATGTCTTGGGTCACGAAGGCCTTGACCTG
AGAACAAAGAGGGGGAAAAAAAAAAAAACCCCACAAAACTAATTACAACTATTCACAGTA
ATCTTCAGCCAATTATTATTTTTTTTTGGTTGAAGACATACAAAAATATCATAATCCTCA
ACTCTACAGCAACAGATTATTTGTACATCTACAAAGCAACAGAGGCTTTACATCGGCCAA
CGAGTGTACGTACCAAGTACGTACATGTACAGCTCAATTACTGGGGGATCCATCCATCCA
TTTTAGAATACAGTAATAAATGTTGAAATATTGTGAGCTTACCTCCCTCAGTCTATTCAG
CTGTCATCCTCCACAGCTCTGGGAAGAAACACAGTATGGAATATGGCCATTAAGATAGAA
ACATGTCTCTTATGATTTCTCTATATGAGGAGTTGTTCTTAAAACAGTACAAAGCTGCCA
CCACTGGGCCCTTGAGCAAGGCCCTTAACTCTCAATTGTGCAATTTGTATTTTTTTTAAA
AAGAAAGAGAAATGTAAATCCTTCAGGAAAAGGGCCTCCGTCATAAATGCCATAAATGTA
AATGAGTGGACGGATGGGTGGACAATGGATGCATGGACACGATCAGCTTTTACACACCCA
AATCGATGTGCAACGCTGATTATTATTATTATTATTATTATTATTATTATTATTATTATT
ATTATTAATAAATAATGTTAAAACAGGGTCCAACACTGTACTGTACAGCATCTGTTATAA
AATCCTAAAGTAATGCGAAACCTAAACATTACACAAAGACTTTTTCAGACTGAACCAGGT
CACACATGCAAAGTCAGTTCCTGCAGGTGACACAGATAATGTGACCAACTGTTTTGGCTT
TCAAAAACAAAAAAGAAAAATTTTGTGTTTCAGAACTAGTGTTGCCAGATTTGCGGAATT
TAAGCAGTTTGGGTTGTTCATACTGGTCTGGAAAAATGTTACGTGTATTTGGTTTCCATG
AAGGAAACACGATTATCGTTTTTGAGATGAATAATGGCTGGGGTTCTTTTTTGATTATTA
TTTGTATCCAAGTACCAATTTAATTGTCAAATTAATTCCAACGACACACAGTAAAGATTT
AATTAAGGAACATTACAATAATACTTTTAAAGTGATCAGAGTCATGGTGCTTTTATTACC
GACCTTCCCACTGACAGAAATCCAAGCGGACATTATTTATAGACTTTTGACTTTATTGTT
TTTAAAAAAAAAAAAAAAAAAAAAAAAGTTATTATGCTTTGTATTATCCCATTTCATTCA
AGTGACCAGTCAAACAGGCTCATAATTACAGTACAAGAACTCAATCATAAATATGATGAC
TTTCATAACAGTGGGTTGTGATTTCCAACACTGGAGCAACACACAAAACAAACAAACAAA
CAAACAAACAAACAAACACACCAGACATTGAGAAACCTGTAAAATGGGGTGAAATAGGAG
GAAAATTCTGACAGTAAAGGGAGGGGAAAACAATCTGGCAACCCTTGACATCAGCTGTTC
ATCATCTTTAAACGCTCTCCAAATGAAAACACCTGTTTATATTTAATTCGGCTTCATCAG
ATGTGTTATATCTGAATGGAGGACATGCATATCTGTAAAGATCTGTAACACACTGTGGTT
TGGAGGAAAACTATAAACTACATTTTCAGGGGAGGAAAAAACAAAACAAAACACATTTAT
CTTCCATCAACCCTAACCCCACTCATCATCCTCATCATCATGCAGTGTATACGATTAGAT
AACTAACCTAGTCTCTGTCTCGTATTGTAGTCTTGTTGCCCTGACTGTAGAAAAGACAGA
CTTCCTCACCTCCACTTTTGCTCTGGCGAGACCATCCAGCTTCTTCCAGTCCACTTCATA
AGCCAAGCTGATGCATGGGAGAAACGCAGCCCATAACAGCGGCCA
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