SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00003211_2.0
Identity
TranscriptSelenoprotein T (SelT)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003211
Transcript release2.0
External IDNone
Gene SPG00003089_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003211_2.0 # Transcript # Selenoprotein T (SelT) # Channel catfish (Ictalurus punctatus) # Full length # Forward
ATGGCCGAATATAGCCACACGGGTATATTAACGGCTCTGTTGCTGTTTACGGCCGTGACG
GTGAGAGATATTTATCTTGGCCGGACTGCGACGGAGCAGCTGGAGCAGCAGGCCGCGAAG
AGCAGCATGGCCTCCAACGGCTTCCCGGAGCCGGAGAGCAGCTCACCCAGGCAGAACAAA
CCCAAATTCTACACAGGACCGGTGCTGAAGTTCCAGTACTGGTGAGCGCATTCTACTATC
CTCAGTTTTCTGTTTGTCGGTCTGCCTTTAATATACTGAATAGTTAAATATTTTAAACAG
AAACTCAGGGTGTCAAAAGCTAATTAACATTGCCAGTAGAAATGGACGTTGTGTCCCCAA
TGGCTCTCCGTGTAATCTATGACACTCCGTAGAGTATAGACGCCATTGTTTTCTTCCTGT
TACAGGAAGTAGGAAGGGAGCCATTACGCGCGCTCTTACGTGTACGCTAGGAAGAGCGTA
CAGTACGCGTGACGCAGATGTCGTCATCAGCGGAGTAACTGCAGGTCGCGCATGCGCATA
AAATTCTTTTGCACTGCTTAGTCGTTCCACAAGGTGGCAACAGTGACCCAGGGCCGTTGA
TTCTCAAGGTAGTCGAAGAAAAAAAACGGACGAGACGGAAACGTTCTTTTCTGGTTGAGT
GGTCGCACAGACCATCTTATCTTTCTCTTTCTTTGTTATTTTTATTTCTTCTTCCTCTAG
TAACAAGTGAGGTAGCATGTCCTTCTCTTCCATTGTTCTCATGTTGTTATGATTCTTCTT
CGTTCGTTGTCTTCACACCAGAAGACCTGCTTTACCGCTCTATACTGACTCTTGTAGGCC
AGGAGGGGTAGTGCAAGTTGTAATGCGCATGCGTCGGAGTAATGTTGTAAATGTTCTTTG
TAATGACAAAATGTCGACATCTTGGTGTTTGTTTGTTTTCAGTATTTCCTGAGGGTACAG
TAAGGTGTTCCAGGAGTACTCCCGGTCTATCAGCCAGCTGTACCCGGACATCCGAATCGA
GGGAGGAAATTACCCTCCCAAACTCCTCAACAAGTCAGTTCCCTCTCCCAAAGTGCACTC
TGTTGCATAAAAGTCAAATTTATTTTATTCCTTACTTGTAAATAACAAAATAACCTGGAA
GAGATGTGGAACGTGGGTTAAACGGTGGCCTGAGCAAAAGTTTATTGTCACGGAGAAAAC
CCGTTTGGAAAACAGTACTCCGGTCCGGAATGCTTGTTTGTGTTTAGATGCGCCTCCTGT
CAGTCAGCCATTTTATAGACACTATGCAGGACACCTGAGATCCTGGAGGTGGGGCTTCAT
GAACATGGGCGGGAATCAATCAAATACTCAACCCACTTAATCTTTAGAGACCTTGAAAAA
ATATATATATACCATTTTAAATGCATTAAGTAAGCACACTCGCACACCACGGACAATTTA
GAAATGGAAATCAGCCCACAACACACGTCTTTAGACTGGGGGAGGAAACCGGAGTGCCCA
GAGGGAAACCCCCGGAGCAAGGGACGCATAGAACATGCAAACTCCGTGCACACAGGGTGG
AGACGGGATTCAAATCTACAACCCTAGAGGCGCGAAGCAAATGTTCTAACCACAAATCCA
CCGTGCCCCACCTCGCACCTGAATGTTCAGGTTACAGCTCTATAAACATGCAACAAACTT
CCCCTCATAATGATTTAAGAGGATGTTGGGCTTGTGTTTATTAAATGCTGTAAAAATACA
AAAGGCCAATCCAAATACAAACACGTTCTGGGCCGAACAGAAGGTTTCCAAACTGGTGGT
GGTGTTTTTCTTCAGCTACACTATACACTTGCTCTCAGGCAGTAGTTTAAAACTGTTATA
TTTTATAATTCCAACCTAATTTCTCACATTATTTGTACTAGTCAGAACGTGGTGGATTTG
TCCTTGATCTCGCAGGACGCGTACGCACCGTGTACATGTTTACACGTCGCTCCTCTGCCT
TTGATTTCCCACAGATACATTGCAAATTTCATCTCCTACTTTAAACTGCTCGCCATTGCC
CTGATCGTCACGGGACAGAATCCTTTCCAAATGCTTGGAACGGACACGCCAAGAGTTTGG
TCCTGGGGTCAAGAAAATAAGGTAAGAGACGCCTCGGTCCAAGATACGGAACGATCGTCG
TGTGTGTTTTTGTGTCTTTCTGTAAAGCCTGTTCTGATAAACGTGAAGAACGTCGAGGCT
AAGAACGGCACACGTGTGCAAGCCGAGAGATCATATACATATTATTATGACGCCTGTACG
TGTAGTAGTTCACGTTATTGTTACGAAAACGCGTCGGACACGTCCTCGGTGAACGTGTCG
GACTGTTGTGTTTGAAGACATGCTTACGTCTTACGCTGGTATCATTTTTCTTTCTCTTTC
AGATATTCTCATGTCTCATGGTGTTTTTCCTCAGTAACATGTTGGAGACCCAGTTCCTGT
CTACAGGAGCATTTGAAATAACGTTAAATGGTATATTTTATTTATTTTTATTAACTTTTC
ATGTTTCTGAAAGGGTATTATTATTATTATTATTATTTATACTACAGTTCTGAACATTAC
TCCAATCATTCTTTATGTACGTTACTGGACGGAAAGATTAAGCTTGTGTTTAAAACAATA
TAATATATATTATTTACAGTTATATTTAGGAGACCTGCAGTTTGTAGCGACGTAAACATT
CGACTTCTTGCATCCTAATGACGTCTTTGCCTTATTTCCGTAACGAATAAAGCACAACAT
GGCGCGCTGCTACAGGAAAAGCATCAACCAACGCTTTTACCATCCTAAAGTTGTTTAATT
TCCAATAACACAACGTCCTGAAGTGTTTTATCGCCCTTACACTACAGCTGCTGTTAGCAA
TTCCTCTTTTTTTTAAAAAAATGATAATTAAATAACGAACATCACTTCATATACTTCGAA
TTTTTTTTTTAAATCAGTTTGGATTTACATTTAATTTTATGGAAGGTTTCCGTCATCTCT
GTTGTTTTAGCTGCTATAAATAGTCTTCCTTTTTGTATCTTTTATTTCTTGAAGTTAATA
AGACGTGAAAATGCAGCTCCTGTTACTGAGAAGCCAGGACTATTAAATAAATATCCCGGT
GACGCGTTAATGTAAGATCGAACACCCGCAGCCGACGCTTCTTTCAGACCTGCTGTTCCA
GAGGACTAACCAACACCCCACACTCTGTCCTGTTTGTAGACGTTCCCATTTGGTCAAAGC
TGCAGTCAGGGTATGTACCGAACATCCAGGAGCTCTTCCAGATCCTGGACAACCACCTCA
AGATGAATCAGGTCGACAACCTCAAATTCGCCTCGGCGTAGCACTGCTGTTCAGGCTGAG
AGAGACAGAGAGAGAGGCAAGTGTTAAAGGCGTTCGACCGAGGCCTGCTTCCTGTTTATC
AGCACACGCTGAAGATGTTTTTCCTGATATCACGATCGACTCAATAAGGCTGACGTTACG
TATGACGCGTAACGACGTGTGCGCCCGCACCGTTTATATGTTTGACCGGGACCGGGTGCA
TTACACCTGTATCCTCTAGAGGGCGGATCAGAGCCGAATTATCTCTCTTCCATGTCAAAC
TGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGAAGGTTTTTGAGGATC
GGGTGAAATACTTCCAAATACCAAACAGTGGTCCAGTTGTTGACGACTTCAGTCTATAAT
ATCCTGATAATGAACAGGAAGATGACCGTGAAGATGAGACGGACTGAAACACATTGATAT
TGATTTTTTTTTTAAAAAAAAGGATTTATTTTTAACAATCCGTTTACATAACCTCTTAGA
TTATCGTTTCTATCAGCACCCCACAATCACCACCTTAAACAAGCACTTAATTTAAAAAAA
ACAAAAACACGTGGATGTAAACGTCACTATAGAAGTGACACAAGCCTTAATTCTTATGTC
TTTTCTTCCACGTGCAGGTCTCTGGAGCTGTTTTTCTGGACAGAGGGACCGTGGACTGTG
GCTTAATGAAGGCCTGTACTGCAAACAGCTTGCTGTGGGTGCAGACTGGATGTTCCTGCC
ACCACAC
Chart Advanced