SelenoDB
Release 2.0
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Transcript Report for SPT00003215_2.0
Identity
TranscriptSelenoprotein W (SelW)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003215
Transcript release2.0
External IDNone
Gene SPG00003093_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003215_2.0 # Transcript # Selenoprotein W (SelW) # Channel catfish (Ictalurus punctatus) # Full length # Forward
ATCAAGCTCACAACGTTGCTTGAGGATGAATTTCCAGGCGACGTTGAGATCGTAAGTTCT
TCTTACACTGGTAGAAAGGATTCAGTGTCCAAAGTGAAGACTGAATGTCTCCCTCCAAAC
AGTGGCATGCATTATGGGTGTTTTGCGTCCTGTAGTTTGAATACTTGCAAAGCAGTGTGA
GATTTCAGACGTGATTATAACGAGTACATTATTTATGCATTAGGATGTGGTTTTTTTGAC
ATGCGCTTAGCTCTTCTGGGAAAAACCTGACTCTGTAATCCTACACCTGCTTCTACACCT
CCAGCTCCATCTCAGTACAATACAATATTTACTATTTAAGAATCTACTCAGAGTTGCGGG
TTTGTTATGAAGACATACCACACACTATGTGTACAATTACTGACTCATGAGGCAGATGGC
GTTTGACTAAATGCCTAAGGAGTGTACATACAAGGTATGCTTAGGTGTGCCTAACAAACT
AATGCTTATTTGACTGTTATTAAACCGTAGTGTTTGGCCAACAGGTGTTAATTAATTTGC
TCAGACAGTAGTTCCGGCTTTAAAGCAAATCACAGGTTCACATTAATGCGCTCACTCACA
GGGACTTGCATAGCGGACACTCGCGTATTCCGAGATTAATTAAAAGTGTATTGTTGTTTA
ACAAAGAAAAAATGTATCAAAGGAGTCTCCAGTGTCAGTGGAAAAGTTTAATGTAAACCT
GTGAGGACTTTGCAATTTCCAGGTTTATAGCTGCTGTAATGTAATATAATAGGAATTAAC
TTGTTTCGCAGACGTTCTACAACATGTATGTAACTACAAATGGATAAAAAGTATTACATG
TCGTTCTTTAATTAAGGTCCAAGCACTGCAGGTGTGTAGGGACCCGTTGTAATTGTTAAT
CTTCTTCTTCTGCTCTTGAGTCTAGGGCAGCCCACAGAACTGTACATAGGAAAGTTAGGA
AATTTGGGACAGAGATAGGGGACAGTCTTTAATGTTACCACAGCAAATTTGGAGTTGCTA
TCTCAAACCCTCCAGTACCACCAACAGCTCAAAGATGCACCCATATATGCTAATAACTTT
TGAATTGTAAGGGCTAGGAACAAAATTCTCCAGCATTTTCCGTCATGAAAATTCTTCCGC
CATTTTGAATTTTCTGAAAAACCAACTTTTTCAATCTCCTTCTAGACCGTTTGTCCAATT
TTCATAAAAATGAAATGGATGTGAGGTTTCATCAAATTCTTCTCAGATCAACTTCAGACC
ATGCCAGCAATAAGATGGATTTCATGTTGATGGGCCAAAATTGAACTGTCGGTCATGTTC
AATTCGTTCATGTTCGATGCAGTGCTTATCTCCTACTTTACCTCTGTTGTGTTTTGCCTC
TGTAGTGCTTGGGCCCCTAATTGCTGCTTGCAGCGATATTTAATAACGCCTCTCTGATGA
TTATATGTTGTCTGAAATTGGTGTAAATAAACAATTTGCACCATTAGTAGTCTTTGACTG
AAATGCAGAATGCAGTCACGTGTTGATACTTGTTGCTATGCCAGGCCTTGTCAACTCAGG
TTTTGTTTGTCTGTCCATCTTTGTCCCACAGACAAGTGAGGGCACTCCCACAACAACTGG
GTGGTTTGAGGTGCAGGTGAATGGCACACTGGTGCACTCGAAGAAGGTGAGGACTATTTG
CTATTATGTATACCTGTGAATGTCACAGCAACATCATTTGCATCCTCGTGAAAACCCTGT
GCTTTGTGATTGTGGGCGGAGTCATCCTCTAAGAGACCATGCCCAGCCCATCCAGATAGA
AATGTCATAGGGAATTAGTGAGAAAACCCTATTCTAAAAACAGAGAAATAACATGATGAA
GGCAACTGCAGTCATTGTAAGATAAAGTAACACTTGTCAACGCACTAATTCTATTCTGTG
TATCGACCTTTACTTTGAGCCAACATTTTTCATCTCATTTCCTCAAAGAGAAAACCTTTT
ATAGTGTTTACATTCCTGCTTGTGGGCAGACTAAATTCTCAAAACCGGTGGATGGAAGCC
ACAATGAATGGAGCTAGGAGATAGAGAGATAAATAGATATAATCTCTACAGGAAATCAAG
CACGTACACTTCTTTGGGGATTGAGCATACAGAGTAAAAGATAGAGACGCATACTTTCTG
TACTTTTTAAAAGAATCCATATTCTTTGTAGATACCCACTTTATGTCCAAAACTCACCCT
CACCTGGATACTGTAGACTTGCATCTGAAAACTGCTGCTGTAATCATAAAGCATGTCCTG
TGCTCATCCAATGCTACTGTATCTTTATCCAAAAATCAACAAGCCATAATGGAAAAACTT
GTCTGGTTTTGACAGAATGGGGACGGCTTCGTGGACAACGATCAGAAGCTTGCCAAGATT
GTGAGTGCCATTGAGAAAGCCATAGGCAAATGAAGCCGCGCTGATGTCGGAGGTAACAAA
ATGTCACTGAACACGTTTGACCGCTTTCGTTTTAATTATGAGGGAGAAGTATGAAAGATT
TGAGCACGATAACTAACCTGAATTACTAGAATTTTTTTAAGACAACATGGTCAGTATGGC
CATGACTCAGCATTTTCTAGTTGATGATATCTTGGTGTGGGGGCGGGGGAAGAGAAATGT
GATGTGATTGCGAGTGATATCATTGTTTTGTTTTGTTCTGTTTATCCCAAATCCCTTGTT
CGAGTGCTGTTCAAAAAGTATGGAATTAAATTTGTGCCAAAAGTATTGAACATAACTTTT
ACAATGAGATAGACAATACATAACAATAACTATACAATGAGAGAGAAGAAAAATACACTG
AAAACTCAGCGGCAAAAATTTAACACGGTCTACAAATAAACAGCATTCTTTGTTAACAGT
CTTTGAACCGAGGTTTTGCGTTGCCATAGTTTTCGTTTACACTCCACAAGTTTACATTCG
CCATTCTGACACAAACCTCTCTTGTGGGTGGGGCTTAACAGAGATTTGCTCTCATTGGCT
AGTGAGAGTTGGATCGACAGCTACCTTGAAGTAGAGACTTAGTGTTTGTACTTTGTAGTG
GAAATTACTTACGTATCTACTTACATACTTACTTAGTCAGTACATTAGTCCGTAATTAAT
ATTTGAGGTTTGGGTAGCTTCATACGACTACCCAAACCCAATTTTTTGAAGATGAGATCC
CCCTCAGCTGGACACACGAGCTGTCGATTCAAACCTCACTAGCGAATCAGAGTAGATCAC
TGTTAAGCCCCGCCCCCACGAGAGGTGCCAGAATGGCAAACGTAAACTTGTGGAGCGTAA
ACAAAAACTCTGGCAGCCATGATTTTTTTTCTGTTTCTTAAAAAGTTACATTCAATACTT
TTGGCACAAATTTAATTCCATGAAAAAACAGGGAAATAGATGTTGCACTTAAGGACAAAG
AAGAATTTCGTCTTCTAAACAATGAATAACTTGTTTGACAGAAATGATAACATTGTTCTT
CTGACCAATCCAAGTCAAGAATTCAGCTCACTCTCTGTTTTTCTCCTCAGTTTGTTCGTC
TCTGTCTGTCGAGCTCTGTGAAAGTGCAACAATGATGGTGACCTCCGAAGTGCCTCTGGC
ACGGAAGTTGCTTGATGCTTTCCCGCTCTTTCACGGA
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