SelenoDB
Release 2.0
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Transcript Report for SPT00003293_2.0
Identity
TranscriptSelenophosphate synthetase (SPS)
SpeciesXiphophorus couchianus (Monterrey platyfish)
Transcript IDSPT00003293
Transcript release2.0
External IDNone
Gene SPG00003171_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003293_2.0 # Transcript # Selenophosphate synthetase (SPS) # Monterrey platyfish (Xiphophorus couchianus) # Full length # Forward
ATGTCGGGCTCACCTACCCCACCTCCCTCAGCTGAGGCTGCGGGTTCCGGGGGGTGTTTC
CCTCCTGGATACAAGCCATTTAAACCCGAGGACCACGGCTTGGAACGCGGGTTCCGTCTT
ACGTCTTATTCTGAGTTGAAGGGATGAGGATGCAAGGTCCCGCAGGAGGTTCTGCTCAAA
CTCCTCGCGGGACTGGAGACGGACCGAGGCGATGGACCGGGCAAGGCTGGAGACCAGGGC
TCTGAGTTCGGCCAACAGTTGCCTCGACCCCGGCTTGGTAAGAAACTCCAGCACCATTCC
TTGTGCTCCGAGCTGCCGAAACCCGGTAGCTAACCTAGATTAGCTAACGAACAGTTGCTA
ATACTATTAGCTTTGAGGACTCGTATGACAGATGATGTGGACCATTCACAGTAGATAAAG
TTTTACAAATCATATAACCTTATTGTAATGCAAACATAAAATAAGCGCGTGTAAACCAGA
ACAATAGTTTCCCGAGCTGTTAAATTACTGCACAAGGTAAATGATTCAGCAGAAACATGT
AATGCTTCAAGTACGAAGTCCACCAATACTCATTCCAAGGAGTTACAATATATGCACAGT
TACTCCTGAAATATGACCAATGAATGTTGCTGCTGTATAGTAACTCTAAGCAACAGCTTC
ACTTTAACTAATTACAGCTGCTTTTCACACTAGCATGTCTCTTTGTATTTATTCCAGGTA
TTGGGATGGACAGTTGTGTGACTCCATTGAGGCATGGAGGTCTCTCTCTGGTCCAGACCA
CTGATTTCTTCTACCCTCTGGTAGAAGATCCATATATGATGGTAAGTTTTTGCTGTGGAT
TTTTTTCACACAGCAGAAGTTATTAAAAACTCTTACAAATTTAGTATGAAACAGATCTAA
AACTAGATTTGGCCCATATTAGTTCATCAGTCAAATGTGGCTTCAGACAGACAACAGATT
ATTGAACACACTGACTTGACATGGGTAGGTATCCACATAAAAGTAATTTAGAAAGTTTAG
TTTGTTAGCTCACTGCCAAAGAGGGCAGAGAACAGTGGCTATTTCTTTGGATCAAACTGG
GGAGGGTTGGAAAGATAACAGATAAATGATTTAATTAATATTCAGCACGCTGAACAGAGA
ACTAACAATGTTAACGTCACACATCAAACATGTTTAACTTTTTCTTCACAGTGACTGCCA
ACTGTGGAGCCCAATAACTACATTAGAACAATGAATTTAAAAGGCTGCACCTAAATTCTG
AAAGATTCATCTGGCGTGGCCTGAACGCACCGTCACACAACTTCCTCCTGGTCCCACGTT
TTTGATGTTCTGTATGAATTTTCCTTCTGTTTAAATAGAAGGACTGTTGTCCTTCTAGTC
AACGAGTGAAATGTGTTTTTAACACAATATGCGAGTAGCCATGTCTGAAAGTGAAAAGTT
TGAGTTGCTTAAGAATCAGACAAAAAAAATATTCCTCCGGAAATCGGAAACGAAAATGAG
ATTGAAAAATACCACACAAAATTATTCAGATACTAAAAAAGCACTCAGAAGCTGGATATG
AAATGCGCTTCCAGTGTTTGCTGTGGGTTGAAGCTGCAGTAGTAGCTGTACAACGGGTCA
CTCTGAAAGGTTTCTAGGCTTTTATAGAAACTGACAGGATGATCAGTGAAACCCTCCAAG
AATCGTTTCTGCTCTGTGACTTGATTTCTGATCGTAGTGACTCCGACTTATAAATGATTG
ATGTGACTAAGTGTTAATGACTAACCGTGTCAGCTTAACTATCACCAAGGGTTTTAATGG
TGATTGTGTGCAGTTTGACGTTTAACTACGCCCGTCGTTGCATTAAAAAAACACGCTAGC
CAACTGAATGTTATCATGTTTGAGAGGGGAACATGAGCAGAACTAAAGAAAATTCACGTT
GTGGATCAAATGTCCAGAATTACTAGAGAGCGGAAAGCTTTGGCTGCAAGCTTAGCCGGT
TTTCTTTTTCATTTGGCTCCAAAACTGTGCGTTTTTAATTCCTCTATAGATGGATGGATT
GGTAGGTGGATGAAACACACACACACTGTGGCAGCGGCTCGGTCATGAGTTCGGTCATAC
GTTACCACATTCCCCCTCAGAGCCTCATGAAGCAGCAGGCTGGTGAAAATTCTTGCCTAA
TGAAAACATGTAAGAGGTTTTTAAGCAGTTTGCATTAACTGACACTAAATGAAGCATCCA
GCCATTGTTCTGCAAGGTTACGCTTTACAAAAAGAGATCAAACTTTAAACTAAATCTACA
TTCACCGTTTACAGCTCAGCTTCTGTACCAACCAGCCTTTTTAAATGGGTTTCCACTCTT
TTTTTTCTTTTTTGTAATTCATTCACTTTCCATTTTCTCATTTCTTCTTAAGAATGATGA
TCTATAAGATATAAGAGGAGCATTTAAAATTTCTAGTAGCCCTGACATGAGTATCAGCAT
GCCTAGTTAAGCCTAGAAATAAAGGAACTTTTCAAAAATGTTCTAATTTGTTGAATATGA
ATGTATCAAACCTTGATATTTCTAGAGCTTTGACCCTTTAAAGACCGTATGCCTAAACAA
CTCCAGTTTTTATTGAAAAAATGTTCACAAAATTTAATTCACTAACTTTTTAACGCAGGT
TTCTTTATGCATAATGTAGTCTGTTTCACATTTACTTCAGGAGGAATTGTTGCAGAAGAC
AGTAGAAAGTTGTGATGTTTTGCCACGAGACTATGACAGCTTTTTAGGGCCATTGTAAAT
TTAATTTTAAAAAAAGTAGAAGATTTCCACTAAAAAATGAAGACATTTTGTGAATAATCT
CTGGAACGCTCTAGAAAAAAACGAGGACATTTCTGAGTTTGGAAAGTTGAAAATTTAGAA
AAAAAACTAAGAAATGTAGATATCAATCTCTGAAATCTTCTTGGGGGGACAATTAAGTTT
TTTCCAAGACACTTCCGTGTTTCTAAAATTTTAAAATGTTTATCAAATTCTGAAATTAGT
CTCAAAATTGAAGTTTTTTGTGTGTTTTTTTTTTGGCAGAAATTAGCTTTTTTTTTCTGC
AGTGGCTCTAATGTGCCGTGGAAACGAGAGCCCATCCAGCAGACAAACATGAATTACAAA
TTGACATCTAGTAGTCCAAAATGTTCTAATGAAATGAAAGATGGTATGAGGTGAAGAAAA
AATGTAACTCATCTCACAATATCCACTTATCACAGCAGAAATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGAATAT
TTGGTCCTCTGTTTTAGTGATTCTGGAAAAAAACTAATTTGCGGGGGGGGATATTTTTAT
TAACTAAATTCAGGTTCTGATCCTGTAAAACTAGTTTGATCCTTCAGTTCGACGCCACAG
TTTTGTGACGGTCCTGATGTCGCTCATTTGTTGACCTCGCCGTGTCCCAGGGAAGGATAG
CGTGTGCGAACGTCCTCAGTGACCTCTACGCCATGGGCATCACGGAGTGCGACAACATGC
TGATGCTGCTGAGCCTCAGTCAGAAGATGAATGAAAAGGTAGCGACATATTCTATTTGTT
TTGTAACTAATGAGCGCCAATGCCAGTAGATCGCAAGTGGCAGCGTAACTGATCCACCAC
AGCATCTGTAGCTGCGTTGTGTTCCCTTCACCGCTGATCTTTAGGTTTTTTGTTCGTCTG
CCCGCAGGATCGAGAGCGAGTGACACCGCTGATGATCAAAGGTTTCCGGGACGCAGCTGA
GGAGGGAGGGACGTCGGTGACAGGGGGCCAGACGGTGATAAACCCCTGGATCATCGTTGG
GGGTGTAGCATCAGTCGTCTGCCAGCCCAATGAGTTCATCATGTGAGTCAGATTTGAGCT
GAAGACGTCCCAAGATGCAACACGTTCGCATTTCCACCTTCAACTTCCTTTTAAAATGGA
AACATTCCGTGTCCAGCACCCCTTCCATCGAGGGGTCTACTCTTTTCCCCCTTTCTGTGT
CTTTCATTCCTTCTGTCTGTTTGTTCTTCTCCCCTCTTTCCCTTAACACGTCAGAGACTG
AATCTCATTATTGATTCCCGATTGGGAAGATGGATTGTTTGAAAAAAAGAGATTAAAATG
CAGTTATTTAACACCAACACTTGCTGCAAGATTTATTGAAATTCAAAAATATTTATAGAA
AACTGTTGGATTTGTAAAAACAAAATAAAAATTCAAAATGAATTTCATAAATTATAAAGT
AATCCCCTGCAAGTTTCTCTCTGAGTTTGTGTGTTGGCAGGATTATTATAATTTTTTTTT
ACCAAACATTTCTGGCAGCATCATTCTCTGGCCCTCTTGGGTTAGAAGAATCTTGTTTCC
TTTTGGCACAAAGAACTATGAACACAGTTGAGTTTTTAATAAAAAAGAAAAAAAGTAAAT
ATGCTTGACGTTTGTTTTTCTGTCCCAGGCCTGACGGCGCGGTACCAGGTGACGTCCTGG
TTCTGACCAAACCTCTGGGGACCCGAGTGGCTGTAAACGCCCACCAGTGGCTCGATCAGG
TCCACCACTCACTTTAATATTGCTATATTTTTATTCATTCATTCTATCAACTTTGGGAGA
TTCATCTGAAACCAATCTCGTCCAGTGACCTTATCCACATCCACAAAGATCTGAAAATCC
GCCGGTCTCCCTGTTCATTCTGCCATGAGAGACGGCTGACTGACAGACCCGCCCACCGGG
TCATGTCTGTGGGCGTGGCTAACAGCAGTAACTGCACCATCTGCGTTTCCATTCGCCATA
TAGTTGCACAAATTGGAATCAATAAAAATAAATTATCTTAGTGGAAACATGGCCATTCCA
AAGAAGTTCACGTTTTTTGATTAAAAACGTTTGCCCTTGGGGTGCTGTGGTGGCGCAGGG
GTTAAACACAACCCACATAAAGAGGACGCCGCAGGTTCGATTCCCAGCCTGGTGATCTTT
GCCTCTCTCACATTACCCACTTTCCTGTCCTAGCACTTTCAAATAAAGGCCACTAGAGCC
AAAAAAAAACATTCATCAATATTAATGTATGTCGTAAAACTGCAATGGAAATGCTTTTTT
TCCACATCACACGAGTCACGTGATCAATAACCGGCTGTTACTACTGGTGGAAACAACGTG
AAGGACAACAGGAAGTGGTTGGAGGATGATGAGGCAGATGTTTTTTTTTAATGACTTATC
GCACAAACAAACCTATTCATGTATGATTTTTAATCTCATTTCTTATTTAGTGGAAACAGT
GCTATTGTGAAATTGTGTTTTTTCGACATCAGCGGCATATTGACAGTTTTGCGCAATGGA
AACAGAGCTAAAGCTACCTACTGGGCGACTTTTCAGACAAAAATATGAATATCGGAGAAA
ATCAGAATCGGCAGGTCAGACTTTTTAAACACTGCTGATCAATCAGAAAACTGCAATCAG
TGCACCCCTAGTCTTTTACGTTATTCAGTCCTGGGGTTTCTGCAGTCAGAATGACAGATC
CTCTGAAATGGACCCTGGTTCTGAGAAAAGGCTCCAGTCAGAACCCAGCTGAAAATGAAA
ACCGTCTGTAGATCAGAAGTTTTCAATTCCTAAGCCTACCTGTTTTTTTTTCTACTTCAT
CAGCCTGAAAAGTGGAACAGGATCAAACTTGTTGTCACCAAAGAGGAGGTCAAAGAGGCA
TATTATGAAGCCATGTTCTCCATGGCAACGCTAAACCGAACAGGTACAACTCCTCCAAAA
CTCTGTGATTTTTTTTTATTTTTGATTTTACCTAACTGTATAAATTCATGTCTACCTGGG
ATTCAGATCCACATTAGTTGTCAGTTGCCAATGTGTAACCACGTAACTAACCCGTTCTTT
CGTTTCTCCTGCAGCGGCGAGCCTAATGCACAAGTACCAGGCTCACGCCGCCACGGATGT
GACCGGTTTCGGTTTACTGGGTCACGCCAACAACCTGGCAGAGCAGCAGAAAAACGAGGT
GGCCTTCGTTATCCACAACCTGCCCATCATAGCCAAGATGAGTGCCATCAGTAAGGCCTG
TGGGAACCTGTTCAACCTGCTGCAGGGCAGATCGGCAGAGACCTCCGGTAAGAGGATGAC
CTGCAGGGCTGCTAGACTGAGAAAGTAGACCTGTGTCGATATTTCTCTGCTTTTCACATT
CTCACTTTTGAAGCTCATTAGTAATTTCTGAATGAGAAACTAGCGCTGCTCCACCTTGCA
GCTTGGCTGAATGAGAGATATTAAGGTGAAACATAAGAAGTGTGTATATTTCTAAATAGA
ACCGCATACGGTGTATTTTTCATCATGCTCTGTTTGGACCGTTTCTCTTTCTCTGGTGTT
GCTCCGCCATCTTTGTTTCTGTATCAGCTGGCTCTGCTAAGGGTCAGCCTCTTCTGGATG
GAGGCCAAACTACAACACTAAAAGGTCTAAGTGGGGGTGTGCTGTGGTGGCGCAGAGGGT
TAGCACACCCCACGTTTGGAGGCCTTAGTCCTCGACGTGGACGTCGCGGGTTCGACTCCC
AGTCCCGGCGACATTTGCCGCATGTCTTCCTCGCCCTCTTTCCTGTCTGCCTACTGTCAC
AAAAAATACGAGCCACTAGTGCCGCAAAAACTCTTCAGAGAAAAAAAAAGAAGGTCTAAG
TGGATGTTATTAGTAAATTGAATGGAACTAATTTTAATCTAATAAATTATTGATCTACAA
TTAGCTGTAGGTCGATTGTTTGTGTCCCTGTTTCAGACTTTTTTTTTTACTTTTAACATA
AAATGGGATTACGTTTAGATAAGCAGAGAAAGTTTAAAGAATAAATAAAACTTGAACTTT
CAAGCTCACCTTAGAATGAAAAGTCTGAATGCTTGTAAAAACAATAGAAATCTACGAGGA
GTGAATCCAGACGTTAACCCCCAGCCTCTCCCAAACAGGTGGGCTGCTGGTGTGTTTACC
CAGAGAGCAGGCGGCCAAGTTCTGTTCAGAGATGAAGAGCCTCAACTCGGCTCAGGGCGC
CTCAAACGGAGCCTGGATCATCGGCATCGTGGAAAAAGGCGACCGGCGGGCGCGCATCAT
CGACAAGCCACGCATCATCGAGGTGCCGGCCCGAGGAAGCCAGGCGGCCAATCAAGATAA
CAGCACCGCCAACCCCGACCCAAGCAGCAA
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