SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00003295_2.0
Identity
TranscriptSelenoprotein R (SelR)
SpeciesXiphophorus couchianus (Monterrey platyfish)
Transcript IDSPT00003295
Transcript release2.0
External IDNone
Gene SPG00003173_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003295_2.0 # Transcript # Selenoprotein R  (SelR) # Monterrey platyfish (Xiphophorus couchianus) # Full length # Forward
ATGTCGTTTTGCTCTTTTGTCGGCGGAGAGGTCTTTAAAGACCACTTTAAACCAGGTATC
TTCTTCTCTACAGTTACTCCTTACGACGTTTTTACGCTTTCTGGCCAACCTAAGCTGTTT
GTCTACCTGTTATGTTATTGCTTGCGTCACACGCTATGTAACTTTTAAAGTGTGTCCAAT
AAATGAAATTTAAATGCGCCTCGGACCGAAACATAGTGGATGAGTTAGTATTATGCTTGC
AGAAAGGCATTAATCCAGCTGTAGACGCTACCTATTTTCGCTGTTCAGGTTTTGTAATCC
GTGTTTTGGTTACACTATAACACAACTCTTACAAAATAAGTTAATTATTACTACGAGTTA
GAGAATTTTCTCTAAAAAAAATGTGGAATCTGGATCTCAATGAGATTTTAAAAAAAGAGA
AAATAATAAAAAAATGTATAATCATAATAAAGTTTTAATCTCATGTATAATCTAATCCAT
TATTTTCTGAAGACTTTCTATCGTTACCTCTTTTTCCTCATTTATGATTCTGATCGCCAT
TTTAGAATGTCAGGAAATCAATCACTGTCCCCGCAGACAGACAGGACTGTCAAAACTACA
CCCTTATCCTTCTTCTACATATCTATTTTCATGACTACATGTGACCAAACCGGCCTCAGC
TATTTTTAGCAGTTCTATGTTTTCATTTCTGTATAAGTAAGTCTTTTGTCCAGCATTCCT
GTTCCATGCTGGAAGAGTAAAATGACCCTTTAAGGCATGCTTTGTATGAAATGTGTGTTA
TTTGTGAATAAATAAAAGTTGAAATTACTTGATCCAAGCAATTCATTTCTTTACTCTAAT
ATGCTTTTTTCCATTTTGCCTTGCATTTGCTCCCCACAGCATCATGCAGCCAAAACTACT
TTTTATAGTTTGAATACTGCGCTCAGGTTCTATTTCAAACAGCAAACTTCTCGTAATTTT
ATTTTTTTCCAAAGGCTTTGTTCTTGTCAGACTTGTGCATGATTAGATATTCCCGTCTGC
TTTATTTTGTGTTCGTCTGTCACACAGAGTACCTAAAATGACATGAAACTTGTGTTAAAA
AAAGTTCTTGGTGTGTGAATACATTTGCAATGGATTGAAACCACAACTTTTGTAAGATCC
CTTCTCCTTTTTTTCTCAGGGATTTATGTTTGCTCTAAATGTGACCATGAGCTGTTCTCC
AGTCGCTCCAAGTACGAGCACTCGTCCCCCTGGCCGGCCTTCACGGAGACCATTCATGAA
AACAGTGTATCCAAATTTAAGGAGAGGCCCGGGGCTTATAAGGTACCTTCAAACTTTGAG
ATTATTAGCAGAATACTGCAAAATGAATAATTTCTCCTTATGAAAAAGACAATATTTACA
TGTTGTTTTGACTAATTGGTGTAATGTTTTCCCAGGTGAAGTGTGGGAAGTGCGGAAACG
GACTGGGACATGAATTTGTGAATGACGGTCCAGCCAAGGGCGTTTCTCGCTTCTGAATCT
TCAGCAGCTCACTGAAGTTCGTCCCTAAAGGTAAAATCTAGTTTAGTCTTTGTTCTATTA
GCAACATATTATAACAAAACCAGGCAACCTTCGTGTAGCAATGCATTGCCAAACATCTTT
CTAATTTGAATAAGTTGCTGAATGTCTCGTTTTTGTCCCCATCCTCAGATAAGGTCGATG
GACAGTAAAGTGAGCTGTGATTCAGGAGACTGAAGGGCCAGAAGCCTCTCTGTGCTGCTG
CAGGTGCGGAAAATGAATGAAGTGTTCTGGGACAAAGTCCTCTCAGGGAGCCCCAGGACT
CTGATGAACTATGACCTCACTGG
Chart Advanced