SelenoDB
Release 2.0
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Transcript Report for SPT00003309_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesXiphophorus couchianus (Monterrey platyfish)
Transcript IDSPT00003309
Transcript release2.0
External IDNone
Gene SPG00003187_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003309_2.0 # Transcript # Selenoprotein O (SelO) # Monterrey platyfish (Xiphophorus couchianus) # Full length # Forward
ATGGCTTATTTAGGACCCCGGCTGGGAGTGTCGCGCCTCTTCCTGCCCCGTGTGACAGTC
TTCAGAGTCCTCTGCACAGTCAGGATGGACGAGATGGGTCTGGCCGTGGGTCGCTCCGCT
TTGGACCGACTCGACTTTGATAACGTCGCCCTTAAGAAACTTCCCCTGGACCCGTCCGAT
GAGCCGGGGGTCCGAATGGTGAAAGGAGCGTGTTTCTCTCGAGTTAATCCTGAGCCGCTG
AGTAACCCTCGGTTCGTGGCCGTTTCGGGCGAAGCCCTAGCGTTGCTGGGGCTTGCCGGA
GAAGAGGTTATGAACGACCCTCTCGGCCCGGAGTACCTGAGCGGGTCTAAAGTCATGCCT
GGATCCGAGCCCGCGGCTCACTGCTACTGCGGTCACCAGTTCGGCCAGTTTGCCGGGCAG
CTGGGGGACGGGGCCGCCTGTTACCTTGGAGAGGTGACGGTTCCACCGGGACAAAATCCA
GAGTTGCTCCGGGAAAATCCGAGCGGGCGGTGGGAGATTCAGGTGAAAGGAGCGGGACTG
ACCCCATATTCCAGGTGACAGGATTGACAGAGTTCGTCTTCGTCGTTTTTATGGCTGTAC
TTTTTGAGTGAAAGGAAAGTAATTGAAGGAATAAAAATATTGTATTGCTTTCCAAACTGC
TTTGTGTTCTTCTATCATCCAACATTAACATGAAGTACATCCCCCCACAGGAAAGCTGAT
GGCCGAAAAGTCCTGCGATCCAGTGTAAGAGAATTCCTTTGCAGTGAGGCGATGTTCTTC
CTCGGTATCCCCACCACCAGAGCAGGCTCCGTGGTCACCTCTGACAGCAAGGTTATAAGG
GACATCTACTACAGCGGGAATCCCTGTTACGAGAAATGCTCAGTGGTCCTCCGCATCGCT
CCCACCTTCCTCAGGTAAGCAGTGACTTTCCTGTGTCAATATATCTCAGATGTCTGACAC
CATCCTGATGTTTTCACTGAGTCTTTCTTTTTCTGCACAGGTTCGGTTCCTTTGAGATCT
TCAAACCGGCTGATGAGTTCACGGGGCGTCAGGGTCCCAGTTACGGACGGGAAGAGATCC
GAGGTCAGATGTTGGATTATGTCATTGAAATGTTTTACCCTGAAATCCAGCGGGGTCATC
CAGACCGGCTGGAGAGAAACGTGGCTTTCTTTAGAGAGGTAAGAGTTTACAGTGACTTGT
TGTAAACATGCTGATTTCAGATGGTAAAGGATGGTTTATTGGCACATAAAAACTAAGATA
GCTGGAAGGTACTACTTTAGTTGGGATGTACTGCAGTAATGTTCCAGAATTACATGTGGT
GTTTATTTTGTTGAATTGGTTCACCTTTCTGTTTGCTTTATCTAACAAGTATTTAGCTTT
ATTCATGTGTTTGAGTTGTCCATACCTGCTTAACATAAGGTCACGTTATGTCTATAACCT
GTGTTTTAAGTTTTTCATATATTTGGAGATGTCTTCCTCTTGTCTCTCTAATTTTAGGTG
ATGTCCCGTACAGCTCGACTCGTGGCTCAGTGGCAGTGTGTTGGATTCTGTCACGGAGTT
CTGAACACCGACAATATGAGTGTTTTGGGACTCACTCTGGACTACGGTCCGTATGGCTTC
ATGGACAGGTGAGGCATAGAGGTTGCAATGTTCATGTGGAATGATTGACTTTATGGTTAT
TTAGAAAATAATATAATGGGCTGTTGAGACATGTATGCACATATTAGCAATTGGATGCAC
AGAGGTCTCGGTTTATTGTTGGTTTTTGCTCATCTGCAGTGGTTGACAACTATATAGACA
AGCCCCAGTAATATTTGAATTAATATGGTTAAAACTCGCTTTTTGTCCCCATCAACAAGC
TTCTGACTTTACTGTCAGTATATGAAACTAATGCTAATCTAAATAAATAAACCTTAATGT
TTAGTTCATAAACTTTCAGTTGTCTTGAAGTTAGATATAATCCAGAGCTGTTGTTAGCTT
GTTTATCCTTCCCAAAACCAGTTTTATGAGGGATCTTTTGCTCTTTTTAACCACTTTCTG
ACAATTTTGTCAGTGTTCCTAGATGTGAAAATTCCACCTTGATCCCTTGAGAAATTAAAC
TTAATCTTAGTCCAATTTGACAATAAACATTTCCCCAGAAGGCGTTGGCCTGTACATGTG
AGCGACTAGAAATTATTAGCTGTTCGGAGAGGTGTTGAATTTGAAGCAGGGACTTCTTCC
TTGGTCTCTGTCCATGTTGTTAAACTCACAGCATTTTGGACTATGACAGTGGCTTTGCAG
GCTCTTGCAGCTCAGTAAAATGTTGACTCTTAAACTTCTTGCCAATCTCCTGTCCTCTTA
CTTCTAAATTTCACTGTCTGTGCTCTGTGACTCATTGTAACTCTATCACTAAAAACGAAT
AAATAAGCAATCACAATGAGTCTGCATAAGTTGGTAAAAGCTTTCCATATCCATTTCAGG
TTTGATCCAGATTTCATTTGCAATGCGTCAGACAACTCTGGGCGATATTCGTACAAGGCC
CAGCCGGCCATCTGCAGGTGGAACCTGGTGAAGCTGGCAGAGGCTCTGGCTCCAGAGTTG
CCACCAGATCGAGCAAAGGCTGTGACGGATGAATACCTGGATCACTTCAACCGCTTCTAC
CTGGAGAACATGAGGAAGAAACTGGGTTTGCTGAGAAAGGAGGAACCCGAGGACGAGATC
CTGATCACTGAGCTGCTGCGTACAATGCACGACACAGGTTGGCCTGCAGCGTGGGATGTT
TGCATTAAATCAAATGAGTATTGATTGACTAATTTTCCATTTCTTTCCTGCAGGCGCTGA
CTTTACGAACACCTTCCGTAACTTAGCTCAGATTTCCTGTCCATCAGAGGGAGAAACGGA
GCGAGACGAGGAAATCGTTAAGAAAGCCTCAGAACTCCTCCTGGAGCAGTGTGCTTCTTT
AGAGGAGCTAAAGTCAGCCAACACACCCACAATGGATCCACGGTGAGATATACAGATAAC
AAACAAGGATAATAGGAATAATTAGATTAAAAATGGCGTGTTCAGCAGAATTGCGTGCAT
TTTGAGATGAATATGTGTAGCTGATTAAAACTAAGAGTCTGAGGAAAACTGTTTTTGCTT
GTTAAAAGATGGTTCTCAATTACATTATCAACAAATTTTGTTTGGAAATTCATCCATCAT
ATTCTGCAAGGACAGTAATACACCCTGTTTAAAATGTGAAGGAGAAAAATGCTAGATTTT
TAAAAAGAATTGCTAAATTATTCTAAATGCGAATTATATNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTAAAAACAATTGCATATGATATCAGAGTCTTTTGACA
GAATTCAATATAGTTATACTATGAGCTAACATGGAGGTGCCATTGTCTCTTAGCTCTACT
ATTTAGGCATAGTTGTCATAGCTAGTACTCCAAAGACCTGATTAAAAGGCAAAAGTACTA
GTTTTATAACTATCTATGCATTTACTTAATTTAATGTAGTTCACATTTCTGACTCAAGAG
GGCAGTGGTGATATATTACGGTATGTATTTCTTACTGCTGGAACTTCCTCAGTTCCAGCA
GTAAGAAGTTCTGGGAAGTATTGTCTTGTATTGTATATTTTTAATTCCAGAAGGTGTAGT
AAAATTAAAATTCAAGTGTTTGTTTCTGCTAATTTAGGTGACTGTGGTATGCAGCTAATA
AAAAAATCAGTTCTTCTGTAGATTTGAAATGAAAAATGATGATTATTATTATTATGCACA
GGCAATAATAAAATATTTTTTTAACATACATCTTATCTTATTGCTGCAAAAAAGACAACC
AGTGAAACCTTACTCAGGGGCAGTAAGCCACTGAAGCTCATTGTTGGCTCTTTAGGTAAT
GGAAAGGTGAGTGGAAGAAAATAAATATTAAAAACAACAAGCTGCAGAAGTAACAAACTT
TCCATTTTAATTATTATATTTTTACAGGGATAATTATTAGGCTTAAAAAATAATAAACGC
AAATATATATTGTGTGAGTTGGTTTACAGTGTGACATTGTTACATACAAACAGGAATATC
AGTCAAAGTTTGAAGCCAATCCAAGTAGCTTGAGGACCAGTTTGAAGTTTCCACAGTCAG
TGATGATTTGTGAAGCCATATAATCTACTGGTATTGGTCCACTGGGTTTTCCCTGCAGAA
CAGTCAATGCAGCTGACTACCAGTGAAGTATTAGAGCACTTCATGCTTCCTTCTGTTTTG
TTTAAATACTCACTTCATTTTTCATCAGGATTTCTGATGAAAAATGAATTTACCAATACA
GAACCTACCAAAGGTTCTGATGTTTAATGATCATGATGTCACTTTGTTTGACTGACCTGA
CCTGAACCTTATAGAGAATCTATGATTTTGCACGGATGATTATTGCCTATAGTACAGCTC
TGCTTTCTTTCTGTATATCAGCGTTCAGACTTTCTGCCCTGTTGTGACTCATTTTTATTT
GTCTGCTTGACAGTGAATTGTCAATGCTGCTCTCCATGGCTCAGAGCAACCCCGCTCTGT
TTGAGATGATCTCAGACAGGGCGACCATCGCGAGACAGTTGGACAGAATGAGCAAACTGA
AGGTCCTGCTGGAGACGAGTCAGGACGAGCTGAGAGCCAGGCAGGCTCAGGAGTGGATCT
CCTGGATCGCCCTCTACAGGTGAGACGCTTTACCTGAGAGAGACTCGACAGGAAAATGGC
TTGCTGTGAGAAAAAGGCTGTGCAAGGACAGAGTGGGGGAGTTTAGTTTTTTTTGTTGTT
TTTTTTTTTTTTCTCGTGGCAAGTGATGGGTGGAAGTCTGACTGATGAAGGGGGCGGACA
GACAGGGAGGAAATGTTGTTTTCAGGCGGATAGCGTCCCATTACTGTAACTGAGTGTTTC
CGTCTTATCATCACTGCACAGGAAACGTCTGGCCCGCGAGCTGGAGGGTCAGAGCGACAT
TCAGGTCGTGCAGGAGGAGAGGGCGAGAGTGATGGACGGCACCAACCCTCGCGTAGTGCT
CAGAAACTACATTGCCCAGAATGCAATAGAGGCTGCTGAGAATGGGGACTTCTCTGAGGT
CAGGATTCATTTTTCACGATCTGGTGTGACTTTAGAATGTTCCACATTCCTTCAATGTCT
CTCTGTGATCAATTCATTGGGCTGCAGGTCCAACGGGTCCTCAAGGTTCTGGAGAAACCG
TTTTCTTCTCAGCCAGGGCTGGAGCTTCCTACTTGGGTGGGTTCACACAGGAGGACTGAA
CAGGGGGAGAGGGATGAAGGAGAGGAGCCACAGCAGGGAACCTCCTCATCATCAACAGAC
ATGAGCCCTGTGCCGTATGACAGCAAGCCCCCAGCATGGGCACGCCAAATCTGCGTCACC
TGATCTTCTTAAACGCTTCCTTAATTGCTGCCCTGCCTAAAAGAACAAGAAAGTTGGAAA
GTGTTGATCACTCTCTTTTACCTTTTACATCCTCTCTTTGGCTCACTGTCCAACTTTCGT
TTTAGCTTTTGGCAAGGCAGCAGTGAGGGAGTTAAGAGAAGTGGCTCTTCACAGATTAGC
ATGATGACACAAAACAGACGGGAGGATGGGAGGTGACTCTCTTCTTCCATTGCCTAAGAT
TTCCAAATTTAAACAGTTTGGGATTTATTTTTAGACTTTCATTAATGAAGATGACAAAAG
CTGCATTGAGTAAAGTCATGGCTCTGACGTAATGTGCAGGTTGCAGAAGAAACAGGTTTA
CAGAAACCCAGCTTGGCTCTCCTCCACCCTGTCTGTTCAGTGTCACTTCTGCTATTTATG
ATGATTCAGGCAACAAGTCCCGTATTGACATGCCTGCCTCTGACAGACTGTGGGTTGTC
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