SelenoDB
Release 2.0
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Transcript Report for SPT00003331_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesGekko japonicus (Gecko)
Transcript IDSPT00003331
Transcript release2.0
External IDNone
Gene SPG00003209_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00003331_2.0 # Transcript # Selenoprotein M (SelM) # Gecko (Gekko japonicus) # Full length # Forward
TTGGGGCTCCTGATTCCGCCGCCGCCGCTGCCGCTGCTGCTCTTGCTCCTCCTGTCGGGG
CCGGTGCGGGGCGTTGAAATCGATCGGAGCCGCCTAGAGGGACTGGCGCGGGGCAAAGTG
GAGGTAAGGCCGGCCCGACGCCAGCCCCTGCCGCGGCGCTCTTGGCGCCTCCTGGAGGGT
TGGGGAGGGAGGGTCCGCGAAGGGGAGCGACGCCCACGTGATTGGTGGAGGCGGCGGCGG
GGGGACGTGAATTAGGCCCCCCTAGAGATGATGCAGGGACCATCGAGCACGTACAGAGTG
CCTTCCCACTGTTAGGGGCGGTGTGCCGTGCGGGGGTCGGGGGTTGCGCTTGGCGCAGCG
AAGCCCGCGTCCTGAGCCAGTGGAGCGAGACGCTAGTCCCTTGACTTGCTCCTTTCAGGG
CCGTGTGTCGGATATGGAAGAAATAGTCGCTTTTTGTGTGAGCCTTTGGGAGGACGGCGA
AGGGCAGTAAAGAGGGGGCAGACCAGGGCCGCGTGGGAGGTGCGAGAACGGGCGGCTGGA
TGCGTCCCCCGCCCCGCCCCGAACTTTTCGAAGAGGGAAAGGGCTCGTCACTCCCAGCTG
TAGCTTTACACCTGCCATATGGTATTCAGAGCAATACTGTTAATGTGCACGGAAGTCGTA
TTTAATAATTGTGTGTGTGGGGGGGGGGGATAATGTAAAAATACCAGATCAGGATTATAG
GTGAAGCTCAGAGGATGAGTAATTATCCTCTTGCTGTGGTTCTCCTTTGATTAGGCCCCT
CCATTTATTTATTAAAGCCATTTATATAACATTTCCCCCTTCTGGCTCAAATTGGTTAGA
CCCATTTTGGAAACGCAGTATCCAGATGGGGAGGGGGGGCCTCCATAAGAAGTTTTTAAA
AAACGTCATTTTGGCACTTAGTAAATAAGCAATAATACTTCTTGTGAGTGTAGTAAACGG
TCTCTTTTCCATGAATATAGCATCTCCCCCCCCCCCATTATATAGCATCCCCCCCCCCCT
GCTTCTGGTAATAAGTGGCCTCCGTGTAAGAGTTACATAAGCAAATGCACCATCCCATGC
CTGAAAGAGTCTGCAGTCTGCCTTGGAACAGCAGGGTTGAAAATGAACTCATTTGAAAAT
AAGATCCTAAGGAATGCCCTGACCTGGGTGGCCCGATCGTGTCAGGTTCTTGGAAGCTAA
GCAGGGTCGGGCCTTGTTAGTACTTGGATGGGAGACCACCCAGGGAATCCAGGGTCACTG
TGCAGAGGCAGGCAGTGGCTATTCATCTCTTGCCTCAGAAACCCTCCGGGAGTTGCCATA
AATCGGCTGTGACTTGATGGCACTTCCCACCACCTTTCAGGAATGGGTATAAAAGTTCTG
AGAATGTGGAGAAGCCAAAGTGGGCATGCAAGCTGGACGGGGACTGGTTAGGAAATATGG
GCCTTGAGAATGGGCACAAAGCATCAGAGTGGTCATGAGGGGGACGCAAGGGTGTAGTTT
GGGAACTGAGAGTCATAAGAACATAAGAGACGCCAATGTTGGATCAGGCCAAAGGCCCAT
CCAGTCCAACACTCTTGAGTCACACAGTGGCCAGAAATACCAGGTGCCATCAGGAGGCCC
TATCTATACCTTGTGGCTAATAGCCACTGATGGACCTCTGCTCCATATGCTTATCTAATT
CCCTTTTGAAGCCGTCCATGCTTGTAGCCGCCACCACTTCCTGTCAGGTGGCAATTGTAG
GGAGCCACAGATGGGGAAACAAAAGATCACAGGAAACCCCAAACTCTGAAAAGAAACAAA
ATGCAAAACCTCCTCCAAAGGTCAGGTGAGTTCGCAAACATCTCTAGCATGTTTTGACTT
GCCCAAGCCCCGGTTCTGCAATGACAAAGGGAGGCAGGGTTGTTGGAGATTGCAGCAAAG
AATTGCACGGTAGAGGAATTGCAAGAAACCCCGAACAAGGAGACAGGATTGGCCTGAGAT
AATCTGGGGCCTGAACACAAATGGCATCCAAGTACAATCCAGCCAGTGGATGTGGTGTTT
AATCTGCTGGGAAGTTCTCCAGCAAAGACCCCACAGAAATAATTTTCATTGGGCTTCTGC
AGAAGAAAGCCTCAGTATGTTGTTTTCCAGCCACAGGAAGAACCCAACTCAAGCAATTTT
TATTATTTATTTTTATTACCTAAAAGAAGATAGATAGATAGACAGATAAATTGAAAACAA
TACACATTAAAAATTATACATTGCGCCTATCACAACAACACCCAAAGCGTTTGACAATAT
CTCGACCTTTACATTTTAACTCAGTTTAATCTTGTTTTAATAAACAATCAAAGGTCATCT
CTCAGTAAACTCAGCTCGCGTAGGCATCTTTTTTCTGTTAGACATACACTGAAATTTCAT
CTATAAGCATAATTAAACCAACACTCCTTTACGCAAACCTCTCTACGGGTTACTTTCTTT
TGCATCTGATATTTCACTGTAAATATTCTTACAGCCACTATTTGATCCCCAACAAATAGC
CATATTTGTTTCAATCTTTTTCTCCATCTGTCCCAGCAATATCAGTGTTGAACAGCATGG
TACTTGACAACCTACAGTTTTGGTGTCTATTTGGCATATGTCTTGCCAGAATTTTCTCAC
ACCCAGGGCAATCCCACCATATATCCCTTATGGGGTAAGGATAGGAATTGGTCTTTAAGT
GCCATCTTGAAGTAGCTATTGGTGGTGGTGTTTCTTTAATAATTTTAACTGTTTATCGAT
TCTGATCGTAATTTACTGAAATGTTGTTCACCTTCTTGGGCCCTATCTGTAGGGGAGGGC
AGTATACCAATTGAATAAATAAAAAAATATATGCAGGGATGTCCCTTTTGTTTGAGAGCA
ATACCAGCATCAAGGGGAAGGGCCCGCAACGAGGGAAAGGCTCAGCTTTCTCAACCGGAA
TTTTGCCGTCTTTGCTCTCCTGGGCTGCCTGGTGGAGAGGGCCAGCCTTCTCTTTGGATC
TGTTCCCTTAATGGTGCCACAAATCCATTGACATAGCATGGCAGATTCCAGGGGGATAGA
AACTTTTTTTGCTGGTGGAAGGAAGGGTCCCTCCCTCCCCAGTGCTACCTTAGGCATGTG
GTTCCTGAGAATTGAAGGAAGTAATAAAGACCGGGGTCGACATAGTGACAGAGGGCTGGT
TAATAAGCAAATTCTTCGTGCAATGGCGAAGGCAGTGGGAAGCTGGCATTAGGTCTTCTG
GAGAGGCATGGTTGACAAAGTGCCACTCACCAGAGCCCAACTCATGCTGGGGGGACTCAA
CACGATGAGGCCCGGATTTGGTGCGGGAACTGAAAACTCAGGTCCCAGTGGGGAAGAAGG
GTGCAGGGCTGGGGACAGCTTAATATTTTTACTTGGATGCAGCTGCTGACCAGAAGATTC
ATTCATAATACCAAATGAAGTGTTGCTTCTTGAGTGCTCTGTTCTGATTACCCCAGGAGG
GCTCCTAGGTAGGCTGCGGTCTGTCTCTGGCATGATCGGGGTGTGGGTGGGGATGCCTCA
CCAGTCAATATTTATGGCATGTTAACAGGAGACCTGAGATAGGATTTGGAGAGCCTGCCC
TATGAGGAAGCTCTGGAGGCCCTGGAGGATTTAGTGTAGAAACAAAAGGGAGCTCTGAAC
ATGGTTTGCAAAATTACGGACAGTGTGGAACGTGGGAGCTTTGTCTTCCACACTCTTAAC
ACTGGTGCTTGGCGTCACGCCGTGAAATTTATTGACTGTAGGACCAGGGTGGACCAAAAG
GGAATTCTGCATACAATGCAGAATTTATGGACTTCACTGCACAAGATATGTTGATGGTCC
CTTGCTTAGATGGCTTTTTAAAAAAGTTTAGGCAATTTCATAGAGAACAACTATGAGTCA
ATCTGCTGCTATTTGCCATAAGGATGAAATGGAACCTCCATGGACAGAAGCAGTATACCT
CTGAATTACAGGTGCTGAGGGAAAAGAACAACATAGGAAGAACATCATTTCTGTGTCTAG
AGGCAACTGCCGGGGGGTTATTGAAAAGTGATGGTTGGACAAGGTGGTCCTTTGAACATA
TCTTGTTAAATGACCCTAAAATGCAGAAAGCAGATTTTCATGTTTAGGCATTTTTATAGT
CAGAAATGAATGGGGAAAGAACTGGAAAAGACCCTTCCTTTTGTTTTGGTAATGACATTG
AACAGGGAGGAAGTGAATGCCAATGTGTTTGTTCTTTGTAGTTTAGAAACAGGTTGACTG
AAGGTAGACAACAGTGAGAAAATTGTGAATGATATGGATTTCATTCAGTTTCCTGGAGCT
TTTTCAAGGAGGATTGGAGGAGAGAGAGGCATCTTTCCTCTTTGTCCCACACGTGGCATG
TACTGGACACTGATAAGCAATATCCGAGGTGTCACACCACCTCAGTGCGCTCTGGGAAAT
AAAGTTCTGGGAGTGTCTGGCACACTGAGGACTACATTTCTCAGGGTGCATTGAAACACC
TGGTGAAGTGGAAGCCGCGTTCAACAAAGAGTCAGAAAAGCCAATAACCTGTGAACGAAC
TGGCTGGCTTCTGGTGCGTCTCTCTGTGTTAGGAGGCCTTACTTTGATGCTGTGTTCTGC
TCTTTTGCAGTCTTGCGGAGGATGACGATTGAATCGCTTGAAAGAGGTAAGTGTTGCTTA
AGCTTCTTGGTGGTTCGATGTGAGAGCTGGCACAATCTAGCAGCTAGGCGAAGAAAGATA
AGCAGGAACGTCCCTGGCTCAGACCTTTCCTCAGTCCATGAATTTAGTAGTCGGTGGCCT
TTGGCAAGTTAGCTCCCCCACCCCCTCACCACAGAGGTGATGATGTTGGCCTACTTTCCT
GGGCTGTTGTATGGACTAGTGAATCGTCTTTATTCAGTACAATTTTTAGCTCACCTTTCC
TGCAGGGACATTAGAATGGCCTCTTCCGCTTGCCCTTCCCCAGTTTATCCCCACAATAAC
CCTGTCAGGCTTGAGAGAAGTGCTCTGAGCAATTGAAATGGCAGCTTAAATGCTCAGTAT
TAATTGGGAAGGAGCCTTTCTCATTCTCCCAACTTCTCCACACTTGGAGGCCAAGAGCAG
ATGGGGGGGTGGGAACCTGCAGGTGTTTCAGTTCACACCAAACCCAGGTGCAGTGTGGTG
TGATCCTCATTAAAATTATTCAGATTATAGTCAGGGATTGTTAATATCACCACCTGTGCA
CCGTGCTTTATAGAGCAAACAGACGCAAACACCACCACCCCAATCCCAGCCTGGGATGCT
GCAGCCTTTTTGCCCAGCCGCATTCTGAAGATTCTTCTCCTTACCCACTGCCAACATGGC
ACTCCATCCTGTTCCTCTAGCATGAAGCCATGAATATCTTTGATTCACCCGTCTCCTTTT
TAGTTCTGTCTCCTAGTCAAGGTACTTTTCTGCATGCAACGTGGGCCCTTCCCTTGAGTC
TCCTTTGACCAAAGAAGTAGTTGGTGTTCTGGCCGTTCCTTCCCTTGGCTTTCTTCTCTA
TTGCCTTTCCTTTCCAGTCTCCAGTTATTTGCATTTGAGTCACCTTTGAGCAACGAAGTA
GTTGGTGTTCTGGCCGTTCCCTCCCTTGGCTTTCTTCTCTGTTGCCTTTCCTTTCCAGTC
TCCAGTTATTTCACTACTGTCCAGAATGCCGCTGCCAAAATGGTTCACCTTCCTCATTGA
CTGTATATGATGATGACTTCCACCCTCACGTCACTGTGCTGCTATTGCACTCCCGTCTTC
ATGCGGACACAAATCTTTGCTTGCCTGCAGTAGCTGCTCGCCTTGCCTTCTCTGCCCTTT
CCCCCCATTGGTCCCTCTGTTCTTCGAACTTTCCCGTCCCTCTTGCTTGTTCCTCTGACT
CACTGCTGGCTTCTTGGGTCCCTCCCACTCTGCCCTTGTGTGGATCACCCTTCCCAATTT
CCCAGGCTGCTGAAGCTGAGACTGTAAGTTCACTAGGGGCACAAAAAAAGTCTTTTTACT
TTTAAAGCTCTATAAAGGGCATTTATACAGTGGTTGTATAAGTACTGACAGAGAGGATGA
CCACAATCAGGGGCGTAGCCTGAAAATGTTGGTTGGTGGGGTGTGAGGAAATCTGGAGGG
GAGCACTCCGGCTGCACCTGCTGCTCCGCAGAAACAGCTCTGGCTCCACTGCGACCTCTG
GTCCTCCTCTAAACCTCTAGTCCTGTGGTTCTCAACCTTCCCAATGCCGCGACCCTTTAA
TACAGTTCTTCATGTTGTGGTGACCCCCAACCATAAAATTATTTCCGTTGCTACTTCATA
ACTTTAATTTTGCTACTGTTATGAATCGTAATATAAATATCTGATATTCAGGATGTGATT
CGGTTCCCAAGACCATCGAAAATTTGTGTTTTCCAATGGTCTTAGGCGACCCCTGTGAAA
GGGTCGTTCGACCCCCAAAGGGGTCGCGGCCCACAGGTTGAGAACCACTGTTCTACGGGG
AGATTTCTGAATAGGCCGTATTCCAACAGGATTTGCCCTTGTGGCCTTAATAGTATTGAT
ACACCTGTTCATGTTTTGCTTAAAAGTGCTGGAAGTGGATTGAAAGTGGATTATTGAGTG
TGTGTGACTGCAGCCTCTGTGTAACAACCCTGGATTTCTTTGGTGGTCTCCCATCCAAGG
ACCAACCAGGTCTGACCCTGCTTAGCTTTTGAGACCATCCAGGTGAGGGGAAAGTGCCAT
CAAGTTGCAGACAATTCCTCGAAGACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CTTGTCACTTATTGCTTTTCAGATTAAAAAAAATCACTTTGACTCAAAGCCATCAGTGCC
CTGTTCAGGTCTTTCCCCCTCTCTTTAATTAGGCAGAAGACTAGTAAAAAAATAAAAATA
AATCAGAATTATGCAAATTAGAGAAAGTCCAAATTTGTTCATTGCTAAGGTGGGTAACAG
TCTCTGCCACTGCGTAACGGAAAGGGAAAGGCAGCATTTTATAAGCTGATGTGCTGTGCA
AACCATTAGAAGGTGAATCCAGTAGTAAGTACTGTGGGTCTACACAAGGTTCAGAGATTA
CCCCTCTGGTCTGGGTTTGTTTTGTAGAGAATTCCATTGAGTGACATGACCCGGGAAGAG
ATCAACCAGCTTGTGCAGGACTTGGGGTTCTACCGGAAGGAGTCGCCTGACTCGCCAGTA
CCTGAAGAGTTCCATCTGGCCCCTGCTCGGCCCCTGCCCACCTCAGAGGAGGCTAAGAAG
GACCCTGTGGCAAAGAGAAAGGGTGGCGCCGAAGACCTCTAGACCTGCTGCTTATGAAAA
CCTCAGGGGCAGATGTTGGTGTTTGGAAGAATGCTGGCACTCCAGAATTGCACATGTGTA
AGTGAACCAGTGTGCATGCACCAGGAAGCTGTTGTGGTATGCGCAGGGCTGTGTATCCAC
TGACTCCGTGGGAGCACAGAAGAGCCGAAGCCAGTGAGATTGGCTGCAAGATTCAAGCAT
CTCACCCTTTTTGGTTACAAAGTATGTTGTTGTTACTGGCTGAACTCTCTGAAGCTTCCT
CAATGAGTTTCCCAACATTTAGAGCAGGGGCCTTCGCGCTTAGCTCTTTCCTGCAAGCAG
TAAGAATGGGCAGATGGTTGTGTGCACAATGAGTGCGTGCACACTTGCATAATTCATACC
AGTCACACAATCTGCCTTTTTTTGTTGTTGCAGACTGTGGCTCTTTGGCTTGTGGGCACA
GAGTACACACAGCCCTGGCTTCCTGCCTGTTGTCTAGTCTAGGGAAGGTGCAACAGAGCT
GTCTGGAAAAGCAGTGCCTCTGTTCTAGCATTGGGTGTGTGTGTTTTTTTTAAGTTATCC
CACTCTGCCCCTGGAGATAAGCCAGACCGTTGCCAGCAAAGTCATATCGACCACTTTTCT
TTCCTGGCAAACGATGCTGAGCCCGGCCGTCTACCAACCTTTGCAAGGCGAAAGTTGTCA
CTCTGGCTTCCGTCTGTTGTAATTGCGATGTGAGGACCACCTTTCCTTCCTGGTGCTGAG
AATGAGCTGCTGTGTTTGGGGTGGGTGGGGTGTATTTTTTAAATTTCCTGCGGCAATGCC
TCAGCTGTATGGGACAGGATGAAGCCCTCTGCTGAAAGTTCTTGGTGCCGAGGGTGGATA
GCAGTGTCCCGTCA
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