SelenoDB
Release 2.0
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Transcript Report for SPT00003354_2.0
Identity
TranscriptSelenoprotein J (SelJ)
SpeciesMiichthys miiuy (Mi-iuy croaker)
Transcript IDSPT00003354
Transcript release2.0
External IDNone
Gene SPG00003232_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003354_2.0 # Transcript # Selenoprotein J (SelJ) # Mi-iuy croaker (Miichthys miiuy) # Full length # Forward
ATGGCTGCAGCTCTGGCCGACAGAGCGATAGGAGCCATCGTAGGATCAGCTGTTGCAGAT
GCAGCAGGTAACAATAGTAAATGCCTCTCATAGTATAGTGTCATATTAAAGATTTAAGGT
GTGTTTCTTTGCCCTACCCCCTGTTTTAATACTCATAAAGCCATAACAGTGTAATTTTCA
GAAGGATTTCTTTTGTCACTAAATTCTGACAGAACATCTTAACAGAAAGCAATTTCTGCT
GAGGTTCTAATTTTTTACTATTTTCTGAGTTTTTTCTGTCCTCAGTCAGCCATTTAAATT
CACTGGACTCCTGGTTCCAATCATAATTAAATTGACCGAATGTCTCGTCCCCTACAGCAC
AGCCCCTGACCTGGGTGTGCGACCTCCCGAAGCTGCATGGGGTTCTGTCTCAGCACCCAA
ACCCTGAGTTCCATTTTGAGTCAATCAACCCCTACTACAGGAGGGAGACGGGCAAACAGA
GCTGCTTTGGAGACCAGGCATTTGTCCTGCTGGAGTCCTTGTCTGAATGTGGAGGTAATC
TTCACTTATTATCTTATTAAGCAACTTCAAAAGTTTACATGTGGTACATGCTGTTTGACA
GTGGTTGTTGACAGTAGATTGATGTTGTGAATAATGTAATGTTAAAACAAAGTTTATCAA
AAAAGTGTTCATATGTTTTTTCTTTTGGCTGGTCAGAAATGCAAAGATCCTGATTGTGGT
TCTGCTGTATTCTGATTGTGTGGCCTTACAGTGTGAGCTTCATGTTTGTCAATTAACCTG
TTTGTCCAGGGCTAAATGTTGATGATCTGAAGCAGCGCACACTGAAGTTCTTTGGCCCTG
GATCAGAGTATGACACACCTGTCAATGATCCTTACAGAGACAAAGGAGGTAGGAAAGCTA
TCCATCTTTTATGTTGTTTTTGAAGAATTAAGCTTTTTCATTTAGTAAGATGGGCATACT
GATTATGTTGTGCTTGTCCAGGGCCAACACCTCAGCTGCCCATTGAAGGACCATGGAGAC
ATGCAAGTTTGAAGAGCTTCCTGAAGAATGTGGATGCAGGCAAAGAGGAGACAGGTAAAC
GTGCAGTACATTCATGACAATAACTTAGACATAACTAAGAGAAACAGCTCTAACTAATGT
GTGTGCGTTTGTCACAGGCTGTGAGAACGACTGTCAGATTGATGGAATAGCTAAACTGGC
TCCTATAGTGGCTTTTTATGCAGGAAAGCCTGACATGCTGGAAAAAATGGAGCAGGCAGT
CCGTGTCACCCAGAACAATGATGAATGTGTGGCAGAGACTCTGGCAGCTGCAAGGTCAGT
TACATCAATTTACTCAACCTTTATTATTTTCACTTTTTGTTACTGATAAGAACACTTTCA
TTTCTAAATCTGGGATCCAAAAAAACATTTGAGCATTTAAGATATTACCTGGTAATCAGC
ACTGCTGCTTCTCAATACACCAGTGATACACACAGTAGAATAGTTGCAGTAGAAATGCAC
TTTATTACATCTGACCAAATAAATTCAGACAAGACCGCATCTGTGATGGTGGAATAAACT
CAAATACACTTGAAGATATATCAATAGTATTACATGTATTTTTTCACACACACTGAAAAT
ACTATGAAACACAAAAAGTGTCATCTTACTTCACACTTGATTGACTCAATGTTTAAATTA
ATTCGCTATTGTATTTATTAAAAAACATATAGAGGGAGAAACCAAGATGGAGGCCAATGA
AATATATCATAGATTGTACATTGACTGATTTTCCAGGTTCCTGGAGTATTTTATCCTGAA
TGGTCCTGATCCAAAAGCCTTGGACTCAGTGCTCGCTCAGCTCAATGACCCAAAGAGAAA
GCAGCCTCAGGATCTGGACAAAGCAGTCATTGGTATGTGAAACCTGCAGCATTGTTGTTT
CACTACACCAGAGTCATGGGACTGAGTCATGGGATTAAAGAGTTAACCCTTCCTCATTCT
GTGTGACTTTAATATCCTGAATAATTGCTATGTTTGTAATAATAATAAACTGAGCTGACT
TTAACATGATCTCAATCTAAAGATAAAGTAAGATGCAAAAATAAAAGTTTATGTAACTTT
ACATTTGTACAAATGACATGTTTATCATAACATTGTTATCTGATTGATTCCAGGGCACAT
TCATCAGGTGAAGGAGAATTTATCAAAGACTCCTCAGGAGCTAATCCCCACTGTATTTTC
AAACTCCTGAGGTACCTGCTCATTTCTTTTCCTCACTTTTTCACCTCCTTTATCAGTCAT
ACTTTCAATAAGCAAAGATCAGTAATTGAGTATTAACTGTAACTCTAGGCAGCTGTCATT
TACAAGACAAATCTTGAGACCAGTTAAAATGCCTTCATCTCATTCACATCTGGTGCTGGT
GTTCTTTCAGGTTTGCCAGGTGCGTTCCAAGCAGCGCTGCATGGAGTCCTGACAGCTAAG
CAATATGAGCAGGCTATTAGAGACAACATGAGCTGTGGAGGATGCACCTGTAGCAGAGGG
TCCTTCATTGGAGCCTGTCTTGGGGCTCAGGTATGTGTGCTAATTGTATATTTATTATAT
TTAATATTATGCCTCTATTGTACGTTTGATTTATAAAATAAATTATTTTAATCCTCACAG
ATTGGATTTGAGGGAATTCCAGCTTCCTGGAGATCCAAAACTCTGTGTTATGACGCAGTG
TTGGAGCATGCCAAGAAGATAACCAAACATCACCAGTAGTTAGTCTGTTTCTGGTAGTGT
AATGCGTTAAACAAAATGAAAAACTGTGGAGCTTTCACAGAACAGTTAATGAAGGTTCTT
GTCTAAACTACTGGATGGCAAGAGCCAGAAGTCTTTGTCTCTG
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