SelenoDB
Release 2.0
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Transcript Report for SPT00003359_2.0
Identity
TranscriptSelenoprotein R (SelR)
SpeciesIctalurus punctatus (Channel catfish)
Transcript IDSPT00003359
Transcript release2.0
External IDNone
Gene SPG00003237_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003359_2.0 # Transcript # Selenoprotein R  (SelR) # Channel catfish (Ictalurus punctatus) # Full length # Forward
GGAATATATGCTTGCTCCCAATGTGCAAACCCACTATTTTCCAGTAGATCCAAATATGCC
CACTCCTCGCCTTGGCCAGCCTTCACAGAAACTATCCATGAAGACAGTGTGACTAAAGTG
ATGGAGACACTCACGGCTTATAAGGTTAATGAAACTGTGATCACTGAATATCACTATTAC
ATGAGCTTTAGTGTTAAAACAGCAGACTTTATACACGGTGTCCTAAAAGTCTCCATACAT
CGGGGAAATTAACACAGTTGAGCAAAATGTCTCCCAAATTTTTTAATTCATATATATAAT
ATTCAGATAACCTTTAAGAATGCCTTTTACAAAAAAAGAATGAAATCATTCTCATGGCTG
AGTCAGGAAGCTGTTGCAAGATTGCAAAGGACTTTAAAACGAAACATGTCAAACATTTCA
CACATGACACTGTTGCCACACTTATGAACAATTCTGAAAGACTGGAAGTGTTGCAAACAT
CCACTGATGATGACACAACTGACGTGGTGCTCACATACATTGTCCCCTATGTATGGAGAC
TTTTTGGACACCCTGTAGAATAGACATAAAAAGGTGAAGTTCATCTTCACTGGTTCCATT
AGCTAAGGTTTATGTTTGGGTTCATGTGCAGGTCATGTGTGGCAAGTGTGGCAACGGACT
AGGCCATGAGTTTCTGAGTGACGGTCCAGAGGAAGGCATGCCAAGATTTTGAATTTTTAG
CCACTCGCTGAAGTTTGTCCCAAAAGGTAAATAGGCTATAACAGAGGTAGTCATTAAATT
CTTATTTTTCAACTATGTAACAGGTCTTAAGGTCTATGGATTACTTATGAATAACATTAC
TTTAAACAGTAATTCATGCATTGTATTTTACAGACAATGTTGACAAGAATTAAAGCGAGG
ATGGAGGTCTGTGACCATGCTCTGTAGCTGTTGTTGCACGCACGTTAAGAGGATGTTCAG
TTCATGAAGTGGACAGGGGAAAATCCACTTGGAACCTCTGTTCACAGATGTATGTGGTCA
TCC
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