SelenoDB
Release 2.0
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Transcript Report for SPT00003394_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesParus major (Great Tit)
Transcript IDSPT00003394
Transcript release2.0
External IDNone
Gene SPG00003272_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003394_2.0 # Transcript # Selenoprotein U (SelU) # Great Tit (Parus major) # Full length # Forward
ATGTCCTTCCTGCCTGACTTGGGGGCCTTCACCATGGGCATGTGGTCTGTTGGCCTTGGA
GCCATTGGTGCAGCTGTGACAGGGATTGTCCTTGCTAACACTGACTTATTTTTGTCCAAG
CCAGAAAAGGCCACACTGGAGTTTTTAGAGGAGATAGAGCTAAAAACTTTGGGACCAGGT
AAGAATCTGGCTATTTCAGACCATGTTCTTCAAAAATTGGACATTTATAAGAACCTTTCT
AAGGCTAGGGCTGGAAGCAGTTTTCTCAGTCTTCCCTAATGTACTTGAGTGTCCTTGATA
TCCAATACTTGTGGTGAAGGAAAAGCAACCAAAGCTGTTATTTCTGGATGAAACAAGACA
CACTTCCAAAAATCAATAATGCACTGATCTCCTTTTATGCATACAGATTTTTATATTTTT
TCTGTTAGAACTCTCTTTGAATGTGGAATTTTCTGTAGTGCTTTGTGTTGGTCCATAAGG
TATTAATTGTTATAAACAAAAATGGCTGATATTTTTGGTGTTGTTTCTCCTGTACAAACA
GAACAAAGGACATTCAAAGCAGGTGAACTATGGAAGGAGAATGGTGCAGTGATCATGGCT
GTACGAAGACCTGGATGATTTTTGTGCAGAGAGGTACTTGCTGGGCTTGGGGATTAATTA
AGAAGAGTTGAGGTCTGATTGCATAAGACAGTCTGTAAATAAAGGGAGGGGATGAACAAG
ACAGTCATCAAATACATCTAAAATGCCTGCAAGGTTTTGTTTTATGGTTCAAACTGGTCA
CCAACTACCAGCATACTTAGTTTCCTTTGCAGCTGTTTTGTATGGTCCAGGTCCTGAGCA
TTTTCCTTCTGAAGGTGATAGTTACAAGATTTTTGCATCTGCCAGGGGCCTAGCCCATGG
TAATTAGAAAGGGAGATTGCACAAGATTCAGTTGGTAATGAGTCTTATGAGCTATTTATA
TATATATAGTCCAAAATAAGTCTCTTTGAGCCAGGTAGTCTCTGGTCAAATGCAGCCCAA
GACTGGACTGGCAGAAAGCCATCAGATAAAGCTCAACTGCAAAAACAGAGGTGTGCATAG
AGTGAATATCTCTAATAATAATAAGTGCTAAATGTTAGGCAGGAAGGTACAGACTCTGGA
GATAAGGAGTTCCTGTTCCTTAACAAGGTGGGCTGGAAAACAAATTTTGATCCTTAACTT
GACATTAGGCTCCTTGGGTGGAGCTCCTTGGAAGCAGACACATAAAATATAATTTGAATG
TACCAAGTGCCTGGGAACAGCTATAGCTTACACCTTGGACATTATGTTTCTCATAGCTAT
AGGGAAAAATAGTTATTATATTGTTACTCACTGGTCTATAACATGGAGTAATTAATATTA
TAACCTCTTCATTAAGGCATCTGCTCCCATCCCAGTAGCAACTACTTAACTAGGTGTAGC
ATTCATGGAAGGTTAAAGAGCTTTGCTCTCTGAACAGATGTAGCGTAGGTGGGAGGAGAA
TGCACTTACATGCCTGACTCTGTAACTTTCACACAGTCGGGAATCCAAGAGTGATTTTTT
TAGTAGTAGTAGTAGTAGTATTACTGAAAGTTTCAATTTTTTCTGTCTGTTCATCCCTGT
TTCTCCTTGGTACTCAGTGTATATTCTAGATGTCCTGCAAGCCTTTCAGCTAAGGTATTT
CACTTAGGTGACTGAGAGTGATCATGTAAAGTGTGTCCGTGTTTTTAAAGTGTAGAGTTG
AGTGTTTTTGTGGGAATTCTGTCCAGTAGAAATGACCTTTCTCCATGGAAGATAGGAAAC
ATATTTTCAGTGCACACTCTGATCAAAACCTCAGGGATCCTTGTACAAACTGTGGGAATT
GGGATTCCTTTAGGAGAACAAAAAACCCAGCAGATGAGTGGTGGCACCTTGCACACCAGA
AAAAGCAGTTTTGCATCTGGGATACTGAAAGTCTATGAAGAAACTCCCTGATTTTTTATT
TAGGGGGATTTAGGAAGGAGAGTCTATCTTCATTACTTACTTGAAGCTTCTATAGACTGC
TCCTGCACAGAGCCCTCAAAATACTTTGCAGAAGGATTGATAATGATGGATGCCAACTTG
GAAAAAGGATTGAAAATCTGAAAAAGTTAAATGATGTGCAGGCATTATTTTTATATCATT
CTAAAATACTTCAAAAGATAATTGAAGCCCTATTACAGGCAAGGTATATCTACATCTCTA
ATTTAAAAATATGTTTTATGCAGTAAATGCTCAGAAGAATCTTCCTCCTCCATGTTTAAC
AAAGGAAATTGTAGTAAATCTGATGAAGAGCTGCCTAAGAGTACAGCTAGCTTAAATGTT
ACAAGTCTGTTTCTGGTCTGAATTCTCAAGCTAGAATTTGTGTGTTTCTGATGGTCTTGA
AATTCAAGGTGAAGCTTTCCAACCTCCATTTATTGACTGAAATGTTTGGGGCTTTTTCCT
TTGCTTAGGAGGCTTCTGAGCTCTCCTCTCTGAAACCCCAGCTGTCCAAGCTGGGTGTCC
CTCTCTATGCTGTTGTGAAAGAGAAGATAGGGACCGAAGTGGAGGATTTTCAGCATTATT
TCAAAGGAGAAATCTTTCTGGATGAAAAGGTATAGTGAAGTTGGTGTTGTTACTTTGTTT
AAAATCGAATCTATGAATGCCCTCTTTGAGGAGCTTGTATAAATAAGTAGAATGTAGTCT
GAATAAAAAAAGGATTTAGTAGCACTGTAGTTTAAGAAGTTAATTGGCTTTGTTTTTCTA
TATTTATACATCCTGCTGAGCTTACAAACTGTGGTGTAACTATGCACTGATAATGCACTC
TTGCAGGATTATTCCTCCCCTTTAACAGGTAAACAATATTGCCTGTTAATACTGATTCCT
TTCTTTCACTGGCTGTGTGACTTGCTGATGTTTATGATGTGTGAATCAAGGTTTGAAGGT
GACACATATAATTAATTCATGATGTACAGGCCAGATTACAGTGTTATGGTTTATCCTGGG
ACACTGGCACATGCTGGATTGCCAATCTCATGTCCTGCAGAACCACCGCCCTGCTTTCTC
CCTAAATCAGGAGATACATTTAAAAATCATTTGAGTTCTGAAGAAAAAAGAATATGTAAT
ACTCAAAATCTACTAGACAATCTTTTATTTTCTCTCTCCCCACTGCCTGTGTGAAAGAAT
CAGGCTGAATTTAAAAAAAAACCCAACAATCAACCAACCAAAAAATATATTTATCACAAA
GGACTGCTGTTGTTTGCACTATGGATGTAGGTGTACATGAGGCTTAAGCACTTGTGGATG
AGCTTAAAATCCACATGAATAAAAGGTCCTTTTCCCTTTGTTTGCTGACATACTTTCTGT
TCCCCTGCAGAAAGGCTTTTATGGTCCACGCAGACGGAAAATGATGTTGTCAGGCTTTTT
CCGCTTGGGAGTTTGGCAAAATTTCTTCCGTGCTTGGAGAAGTGGATATAGTGGAAATCT
GGAAGGAGAAGGATTCACGCTGGGAGGTGTATATGTGATTGGGGCAGGAAGACAGGTACT
GCAGGCCATCTAGGAGGCTTTTATCTCTCGTATCAGATCAGAAGTTTGTTTCCTGGGATT
GTTTGGTTGGGCAGTGGATCTTTTGCAGAGAGATGTGTCTGAATTTGTCTTTTGTGTCTT
TGACCTAGGGTGTTTTACTGGAGCATCGTGAGAAAGAATTTGGAGACAAAGTCAGCCTTC
CATCTGTCCTTGAAGCTGCAGAGAAGATAAAAACACAAGCTTCATAAGTGGAAAAACAGT
TGCACATGTTTCTGATTAGAGCTTGAAATGTAGAATGTATCCATGTCTTGAATGTATGGT
GTAATTGCTTAACTATTTAGGGATCAATGCACATGAAAGGCTCTCTATTCAAACACAGAA
AATTATGAATATCCTCTTGGATTGTTTTTGGTTCCTTTGCAGTCCTCCAGGTGGCCAGGA
TTTTGACTGGTCCTTTGTATCTGACTGTATTAATGAAAGGCTGGGTCTAAAATCTGACCT
AGCCTAGATGTTTTCAGTCAGAGA
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