SelenoDB
Release 2.0
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Transcript Report for SPT00003463_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesMiichthys miiuy (Mi-iuy croaker)
Transcript IDSPT00003463
Transcript release2.0
External IDNone
Gene SPG00003341_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00003463_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Mi-iuy croaker (Miichthys miiuy) # Full length # Forward
AGAGAGGGAGGGAATGGGAGAGTTAACAGAGTCTATGGGCTCCCAGCGACAGTCCATCAT
GGCGTCGTAGAGTTCCTCGCTGCGTTGCATAAAATCTTTGTTCCACTGCTCCACGTCACA
TTCAGGGATCGGCTCTGTAAAAAAGAAACAGCAAGCGATCATTCGTACATGTCAGTGTGT
CGAACATATCTGTGCATGTGAGCAACAAAGAACACCACAAATACGGTATGACACTTCATT
AAACAATCAGATAAACAAAGTCCAGGACCCTTTTGGGCCACCAGACAACCCTAAAGTTGT
GGATTTATCAAGTGAGGTATTACCTTCTGCGTTGTCCTCCTCTATGCCCCCGGCCTCCTC
GTGGCTCTGCTGGGGAAACACATTAAACACTGAGAATCATTTACAGTCACATAAATAAAA
CCCAGCAGGAACACTGGTCTTTAGGGGTTCTCTCACCTCTGTAGCTCCTGACATGTCAGT
GGACATGGGTGGCACGGGAGGTGGTGGCATCATGTGGCCTGGTGGGGGGTATCCATAAGG
CCCGTAGCTATAGTTGTAGCCACTGTTGTAGCCGCTGCTGTAGCCACTGTTATAGCCGCT
GTTGTTGTAGCCGCTGTACTGGTCATAGCCACCCCACTGAGAGTAGTAGCCCCCTTGACC
TGCGGTGCTATTGCTGCCATAGTAACTGGACTGGGACTGGTTATAGTTGTTATGGTAATT
CTGGCCCTGGCCCCCGTGGTAGTTGCTCATCTTCTGGCTGCAACACAACAAGATTTTATC
AACTTTTTGATGGCAACTTGGTGAAGGACACTTTCAAGATGAACTTTACCAATAATCTAA
CAATCTGAAGGGTCATTCTACATCATCAGTTCTTTTATCATGTTTCCATGTCAGCATCTT
ACCTCTTTGCCACGGCGATACTGAGCCTGAGCGGCTTCCCCCCAAGCATCGTACCCTGGC
ACTCCTCGATCGCCTTCTTCTGCTCGCTCTCCTCCCCAAACTTGACAAAGCCGTAACCTC
TGCAAGTCAAACAGCAATTACACCTTGTCTCAACACCACCACACACTCCATAGTTGGCAT
TTAAAAGCCACTTATAATGAGAAACAGAATATAATGGGTATTATTATGGTAGAACTGAAA
CTTGTTGTTTTACTTTTAACATGAGGTAGCATCACTTGAATTGTGAGTTGCTCTTGCTTA
GCCTATATGGGGAAAACAATAGTTTTAGCATAAGACGGTAAGAAAACATTTCTTCATCAG
CCTCTTTCTTTGAAAATAGATGAAGATGTACTGAAGGTCAACGTCCACAGCACTGCTATC
TAAATAATCATTACAGCACAACAAAGATCAAGAAATCATCTGAATACTTTTCACATGTCT
GAGGCCGCATCGGTCCACCTCTGAGCTCACATACCTGGAGTATCCATACTGATCAGTGAC
CACTTTGGCTCCTTTGCAGGAGAGGTACTTCTTGAAAACTTGGTGCAGTTGGAAGTCATC
CACCTCAGAGGCCAAGTCGCCCACAAACACAGAGAACTCCGGCCTGAAGTGAGGAAAATA
TTCCACAAGACATACAAGCCATTATACAATTTTTTTCACATATGCAGTACTCCAAACACC
TGGAAACAAACTTTAAAGTGTATTATATGGATTTTTTCTCAAGTGTAGTCTGCTATGGTA
CCAGAAAATTATCCCTCTGTGAATTGTGATATTAATTTCAGCCATATTGCCGAGTCATGG
CCTCCATGACAGAGATCAGCAAGGCATCAAGTACTAGAGATGTTGTTTAATTTCACATTC
ACACTGATGGTCATCCAAACTGATACCATCCATTCATCTCAGCAGATCTTCAGTGTTCTT
TTTAGAATTTAAACCAACATTTCATGAAAAACAGTTCTTCATTAGGGGTTTAGGGTGTAT
TCAGACAAGATCAGGTGCTGTGACGAAAACATTTGAGTGAGGGTCGTCCATTTTGGCGGT
GCGACGCGAGCCGCAGGGGTTTCCGCCGAGAGGAAGAAAAAAAGAAAAATGCAGCAACAT
ACAGCAGTGAAGTTAAGCCAGATCCAACTTTTGCAAAAACGCAGCCAGATGTCATGCTGC
AGCTGCAAATCAATGTCTCTGAAACTGAGACTATCCAGGTAGATTCATGGACTAAACTTT
GATACTCTACCTGTTGCTTCTAAATTTGTGTCTGGCTTTTAATTTACGCTGCAAAATCAT
GACACTAAGAAGTTTAATTTGCTTGGTGTCCAGTGGTTTGAGAGAGAGAGAGACAGTGAA
TGAGAGTGAGCGAGCGGCAGCATTGATGCAGCTGGTCATTCAAATAAATAAAAAGTTATT
TCCTGATTGTTTCACAGCGGTTATGTTATATATTCACTGCAGCACCTCCTGTCTGAATGT
AACCTAAAGACAACAGGTGTCAGCTGATTTTTTGAAGTGGAGCATTGACATGCAAATGTT
GAGCATGAATCATGTCTTACCCTGCCTCTGGCCGTTTTCCATACGTGGCATAGTTTAGCT
TAAACTTCCGGGGCTGCACATGGGAAGAGAAAACACACACACTGAGCCGACGTCAAACAC
CAGAGACGTGTAGTATAGCACTGATATTGCTGGAAATAAAGAGTGGAGTTATTATGGTTG
TTATTTGGGTTTTACATACCTCCACCACCCAGACCAGCCTTTAGCCCATTCCTCAGTTAG
TTCCTACCAGAGACTCTATTCACCAGCTTCAAACAAAGTACATTCATGTACAAGCAGCCT
CTCAGCCACCTTCAGCAGCAGGTACAGGCCGGTGGACAGGGGAGCCCAGTAGCTTGGCCA
GCTCACAGGGCCAGCAGCATTTCAAGTTCAGTAGCAAGCAGCTAAAGCTCACAACTTTAC
ACAGCGCTTAGAAAAGGTTCGAGCTGGCAGGATTCATTTTGTTACACATCACCAGACTCT
TCAGGAGACTCACTGTCACTACAGCCAATATAGAATACAGTGTCACTTTGTATCTGTAAC
ACTGTTTAGTATTACTTCTTTAGAAATGATAGGACAGTAAGTGGTAGCTTAAGTAACTTA
AAGAGCAAATCAAACAGATTTGGCACATTTAAACTCTGTTAACAAGAATCTGGTGTGTTT
ACAGATAAAAATGAAAACCTCAAACTATAGACTTAAACATTCAGCACTATTGAGCTACTA
TCAGAAAAAAAAAGAGGACCAAGACTAGTTGAGCTCCACTATCCACAGTCAAATCAACAA
ATAAATACTGCTTGATAACATAACTAAGACTGAAAAAAAAAAGGAAGGCGGTATTAAATT
GTCAACAGTATACACTGTATATAATATATATGTTTGTATTGATGGAGAAACAGTATTTAT
ATATTGAAGTAAGGATTGCATTAATATGAGGAAGTATTTGGCAATTACACCATAGAACTG
ACCGGGTTTGATCCGGGAACCAGTTTTCCATTGAGTCTTTGGACACAGCGGTCAACACTT
GCTTCATCAGCCAGCTCCACAAAGCAGTATCCTGCTGAACCACTGCAGGGGAGGGACACG
AAGAGAAAACATTTACTATAAGAACATTAGAACATTTGATTTTGGCTAAGAGGGAGTGAT
GTTTCATTAGTCACTCAACACGCCCTCGTTCATGTCACCAAAGTGTTGTTCCATTTGTCT
GACAACTTAGTGAGATGGACCATCAGGGCTGAGGAAGCGAGTCAACTACAATGTCACTCC
AAACAGTGTATATCACCCACAATGCATTGCAGTGTTTTTATATATTTGCAAGAAATTAAA
TCCATGGTTTGGAAGTAGCATGTGAAAACTGTGTTTGCAAATCTCTTTGATATTTTACTG
ATTTACTCACAGTTGTCAGCTTGTGTTCTTTATTCACAACATTGTCTGTAAACAAATTGA
ACAATGACTGTTTTGCAAGACAACATGAACTCATAGTGATCGTCGTTAAGATATTCATGA
TACAGATGATCACAAACAGGAATTTCTACATCTAACACCAAAGGCTGGGGTTTAGTGAAT
GAGAGGAATTGAAACCACATGGTTCCTGTGGTCATTCACGCCAGTCAAAGCAGAACACAG
TCTGCTGTAGGTGTGTCTTACTTACCCTGTTATCCTGTGAGTGATGATCTTCACTCCAAA
CGGTGACTCTCCCATAGCACTAAAGGCCTGCTTGATGAAATTCTCATCCATGTATGGGTC
CAACTAAAACACACATGAAAATACATTTTACATACATCACATTCAGTTTGAACCAAAAAG
AAAGTTCACAACAGAACAGATACAACAACAACAACTCATTTTTAATGGTCCTTGCAACAC
TGGCTGTAGCTCTACTGTGTTTCAGTAAAAAATGCTTAAAAATTACAGGTCATTATTTAT
GTAAAATTATGTTATTATTAATCAGAAACAATTTAAATGTCGTCAAGGGGCAACAACTGC
CATTACTGATGATGTGTTGCATTCAGGTACCACAGAAAACAACAAAACAAAAATGTAATG
GAGTCAGGTTTGACATTTCAGTTTCTGTGTCACACATACAGAATATATATAATATATACA
AGTGTATATATTTAATGACATTTGCCGTTTATGTCTCATGTGAATTGGTTAATTATTTCC
CAGTGGGGACAGTTTTGTTTACATATTAGCTGCTTTAGCTTGTAGCTAACCACTTGTTAG
CTCGTTAAATGTCGACATTACGTCATGTCACTTTTCAAGGAATATTCTTGAACTGTTCAC
AGCTACACTGCCGGCCCAAAATAAATATGAGTGTTGTCTCAGCTATACAGGAACTCCAAT
GATTGTACCATGTATCATCTAACGGTTGCTAACAAACATGGGTAGACAAATTAGCATGAA
ACAGTCACGTGGGAGCCGCTTGGGAGCTTAGTGAGTCATTTGACTACCATGTTGACTATT
TACGTTATTTAAGGTGTTAGCCAACGAAGTAGCTCCGTCAGTACAGAGGTTAGCTTCACA
TTTTAGCACAGGGGTCACTGAACGTAACCGAGCTAACAGCCAGCATGCGCAGCTAAGCTA
ACGTCCCCACAGTGAAAGAAGCAGAGGCTTCAAACATACGTCACCCATCCACAGGCTGGT
CTGTCTGTTAAACAT
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