SelenoDB: selenoproteins database

SelenoDB

Release 2.0

Chart

Variant Report for SNP00000292_2.0

Gene

Glutathione peroxidase 1 (GPx1)

Species

Homo sapiens (Human)

Transcript

Variant

C (A in the Reference genome)

State

Derived (A in the Ancestral genome)

Type

Non-coding

Populations

Name	Region	# Individuals	Allele Frequency
Palestinian	Middle East	45	0.011

Genetic
Differentiation

F_ST

	Africa	Middle East	Europe	Central-South Asia	East Asia	Oceania	America
Africa	0.000
Middle East	0.246	0.494
Europe	0.000	0.154	0.000
Central-South Asia	0.000	0.164	0.000	0.000
East Asia	0.000	0.000	0.000	0.000	0.000
Oceania	0.000	0.000	0.000	0.000	0.000	0.000
America	0.000	0.000	0.000	0.000	0.000	0.000	0.000

High F_ST

Low F_ST

P-value

	Africa	Middle East	Europe	Central-South Asia	East Asia	Oceania	America
Africa	1.000
Middle East	0.257	0.007
Europe	1.000	0.841	1.000
Central-South Asia	1.000	0.793	1.000	1.000
East Asia	1.000	1.000	1.000	1.000	1.000
Oceania	1.000	1.000	1.000	1.000	1.000	0.999
America	1.000	1.000	1.000	1.000	1.000	1.000	1.000

Low P-value

High P-value

VariantID

SNP00000292

Variant release

2.0

External ID

None

Sequence

SEQ00000004_2.0

Chart

Search Species for Family

Advanced

© 2007-2024 SelenoDB
- A public source of selenium -