SelenoDB
Release 2.0
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Variant Report for SNP00000321_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
TranscriptSPT_
VariantT (G in the Reference genome)
State Derived (G in the Ancestral genome)
Type Non-coding
Populations
Name Region # Individuals Allele Frequency
Balochi Central-South Asia 18 0.056
Pathan Central-South Asia 20 0.025
Uygur Central-South Asia 7 0.071
Han East Asia 25 0.020
Japanese East Asia 21 0.048
Naxi East Asia 6 0.083
Tujia East Asia 7 0.071
French Europe 18 0.028
Russian Europe 18 0.028
Melanesian Oceania 12 0.042
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.000
Middle East0.0000.000
Europe0.2750.2110.233
Central-South Asia0.3130.2240.2470.301
East Asia0.2680.2770.1940.1870.180
Oceania0.4750.4870.3430.3270.1410.021
America0.0000.0000.0010.0080.0100.0070.000

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa1.000
Middle East1.0001.000
Europe0.1900.3970.101
Central-South Asia0.0060.0470.0010.000
East Asia0.0320.0720.6670.0010.000
Oceania0.0000.0010.0010.0000.0280.108
America1.0001.0001.0000.9981.0000.8541.000

Low P-value

High P-value

VariantIDSNP00000321
Variant release2.0
External IDNone
SequenceSEQ00000004_2.0
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