SelenoDB
Release 2.0
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Variant Report for SNP00000324_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
TranscriptSPT_
VariantT (G in the Reference genome)
State Derived (G in the Ancestral genome)
Type Non-coding
Populations
Name Region # Individuals Allele Frequency
San Africa 4 0.125
Makrani Central-South Asia 19 0.026
Cambodian East Asia 8 0.062
Dai East Asia 9 0.056
Daur East Asia 8 0.125
Japanese East Asia 22 0.023
Tujia East Asia 10 0.100
French Europe 20 0.025
Druze Middle East 31 0.016
Mozabite Middle East 21 0.024
Palestinian Middle East 41 0.012
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.148
Middle East0.6680.493
Europe0.1320.2770.071
Central-South Asia0.1240.3820.0690.136
East Asia0.2680.0880.2580.2640.096
Oceania0.0240.0010.0010.0010.0710.000
America0.0180.0010.0000.0000.0140.0000.000

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.724
Middle East0.0000.019
Europe0.9990.0230.999
Central-South Asia1.0000.0001.0000.988
East Asia0.0000.7600.0000.0000.000
Oceania1.0000.9601.0001.0000.8750.999
America1.0001.0001.0001.0001.0001.0001.000

Low P-value

High P-value

VariantIDSNP00000324
Variant release2.0
External IDNone
SequenceSEQ00000004_2.0
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