SelenoDB
Release 2.0
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Variant Report for SNP00000325_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
TranscriptSPT_
VariantT (G in the Reference genome)
State Derived (G in the Ancestral genome)
Type Non-coding
Populations
Name Region # Individuals Allele Frequency
Maya America 19 0.026
Makrani Central-South Asia 19 0.026
Naxi East Asia 5 0.100
Tujia East Asia 10 0.050
Yakut East Asia 22 0.023
Bergamo Europe 12 0.042
Russian Europe 20 0.025
Mozabite Middle East 21 0.048
Melanesian Oceania 12 0.042
Papuan Oceania 13 0.038
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.000
Middle East0.2340.331
Europe0.2400.2470.246
Central-South Asia0.1070.1900.1910.136
East Asia0.1770.1410.1370.1610.249
Oceania0.9540.7350.7220.8580.4500.000
America0.1930.1500.1470.1730.1620.0070.192

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa1.000
Middle East0.7380.058
Europe0.2580.0430.018
Central-South Asia1.0000.6400.5380.997
East Asia0.8020.2370.7350.8380.000
Oceania0.0000.0000.0000.0000.0000.999
America0.3980.3920.7270.8080.4600.1410.270

Low P-value

High P-value

VariantIDSNP00000325
Variant release2.0
External IDNone
SequenceSEQ00000004_2.0
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