SelenoDB
Release 2.0
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Variant Report for SNP00000341_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
TranscriptSPT00000017_2.0
VariantG (T in the Reference genome)
State Derived (T in the Ancestral genome)
Type Non-coding
Populations
Name Region # Individuals Allele Frequency
Surui America 7 0.071
Hazara Central-South Asia 9 0.056
Pathan Central-South Asia 22 0.023
Sindhi Central-South Asia 15 0.033
Dai East Asia 2 0.500
Han East Asia 17 0.059
Japanese East Asia 13 0.077
Naxi East Asia 4 0.125
She East Asia 3 0.333
Tujia East Asia 8 0.188
Yakut East Asia 14 0.107
Adygei Europe 13 0.038
Basque Europe 18 0.111
French Europe 16 0.031
Tuscan Europe 5 0.100
Druze Middle East 28 0.018
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.000
Middle East0.0000.005
Europe0.0310.0600.044
Central-South Asia0.0020.0060.0340.005
East Asia0.0450.0760.0420.0490.052
Oceania0.0000.0000.0330.0020.0480.000
America0.0120.0260.0280.0140.0370.0140.020

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa1.000
Middle East1.0000.421
Europe0.4370.0010.000
Central-South Asia1.0000.9740.0000.802
East Asia0.8280.3020.0070.1340.002
Oceania1.0001.0000.0940.9940.6380.999
America1.0000.9600.1410.9940.2020.9660.815

Low P-value

High P-value

VariantIDSNP00000341
Variant release2.0
External IDNone
SequenceSEQ00000004_2.0
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