SelenoDB
Release 2.0
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Variant Report for SNP00000345_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
TranscriptSPT00000017_2.0
VariantG (C in the Reference genome)
State Derived (C in the Ancestral genome)
Type Non-coding
Populations
Name Region # Individuals Allele Frequency
Biaka Africa 14 0.036
Karitiana America 8 0.062
Hazara Central-South Asia 15 0.133
Sindhi Central-South Asia 12 0.042
Cambodian East Asia 5 0.100
Han East Asia 9 0.056
Japanese East Asia 7 0.071
Mongola East Asia 7 0.071
Naxi East Asia 2 0.250
Oroqen East Asia 4 0.125
She East Asia 2 0.250
Tu East Asia 6 0.083
Tujia East Asia 8 0.125
Xibo East Asia 8 0.125
Yakut East Asia 14 0.036
Russian Europe 21 0.024
Sardinian Europe 18 0.056
Mozabite Middle East 20 0.025
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.002
Middle East0.2150.331
Europe0.3310.3390.380
Central-South Asia0.1960.2780.3150.279
East Asia0.6610.6080.4630.5870.302
Oceania0.0010.0000.0050.0140.6950.000
America0.2040.1830.1440.1880.0760.2360.167

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa1.000
Middle East0.4610.056
Europe0.0060.0340.004
Central-South Asia0.6740.0660.0000.003
East Asia0.0000.0000.0000.0000.003
Oceania1.0000.9610.8970.9660.0000.999
America0.2130.3690.2170.0200.0060.3180.061

Low P-value

High P-value

VariantIDSNP00000345
Variant release2.0
External IDNone
SequenceSEQ00000004_2.0
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