SelenoDB
Release 2.0
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Variant Report for SNP00000357_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
TranscriptSPT00000017_2.0
VariantG (A in the Reference genome)
State Derived (A in the Ancestral genome)
Type Non-coding
Populations
Name Region # Individuals Allele Frequency
Hazara Central-South Asia 13 0.077
Sindhi Central-South Asia 10 0.050
Dai East Asia 3 0.167
Han East Asia 21 0.071
Japanese East Asia 10 0.050
Lahu East Asia 2 0.250
Miaozu East Asia 9 0.111
She East Asia 2 0.250
Tu East Asia 5 0.100
French Europe 20 0.050
Druze Middle East 29 0.017
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.000
Middle East0.2440.168
Europe0.1330.1090.095
Central-South Asia0.1300.1490.1030.144
East Asia0.1470.1230.1310.1360.026
Oceania0.0000.0000.0040.0090.0860.000
America0.0000.0000.0030.0070.0150.0000.000

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa1.000
Middle East0.6010.192
Europe1.0000.8760.704
Central-South Asia1.0000.4800.9520.535
East Asia0.9910.9340.7270.6040.324
Oceania1.0000.9991.0000.9990.9620.999
America1.0001.0001.0001.0001.0001.0001.000

Low P-value

High P-value

VariantIDSNP00000357
Variant release2.0
External IDNone
SequenceSEQ00000004_2.0
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